G202991



Basic Information


Item Value
gene id G202991
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4130712 ~ 4176770 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU230386
TACATCCCAAAAATGAATTAACGGAAAAGGACATTGCATATTTTTGTACAATTTCAATACTGTTCAGTTACCACTTGAGTCGCAACCAGTTGAGAACCACTGCCTTACAGCTTCCATTTGTCTACCAACATGGCTGTGAATGAGTGCAGTCAGCCTTTACCCTTTGTTCCAGCAGGGCTCTGCGGATGGACACTCTCTGCTCCAGGTCTTTAACCTCCCTCTCATGCTGAGTGTCAGTATGCATCTTGATTTTACTCTGGTAGGCATTAAGCAGCTCCAACTCCTGCTGCAGCTGCATCCTCAGCACCTGATACTCCGCTTCCTGCGTCTCATCCAATCGCAGCTGGAGTGAAACAGCACAAAATGGCAAAGGTCAATAAGGCAGGGGTAACTCTGATGCTGGAGTCTGGCTGCTGGGATCAGATGTAGGGTGATATACCTTACCATGTACTGTTTTGAGAGTATGTCACTGATGGTGTAGGTTTGAGTGAGGGTTTTGGTGGTCAGTGGGATGGAATTGTGATTCATGTGTCCTTGCCTTACTCACAGCCTGTGTGGACAGCATGTCGTTGATCGAGTGGTCGTATTGCTCAGCCAGAATAGCCAGCTTACGAGTCTGCTCATCTTTAAGACGCTTCAGCACGGCCTTGTGGTCCGACTTCGGTGTGTTCTCCAGCAGATGGTTCCTCAGAGCTTTATACTGACGTGTTTGGATCTTACACGTGTCTTGGAACTGACGCTTAATCTGCAGCTCTTTGGACTACAGGAACAGGGAAGAGCGTTGTAACAAGGATTGACAACAGACAGATAAGAAAGAGTGGAGGGGGAAAGAAGTGTCACAGCACGAATGTGCTGTCATTGGTTATAAAACACTTTAAAACAATGTCATTTATTTGTAGTATGTAGAATCATATTGTGGGACACATGAAGTAGCACAAATAATTTTGAGCAGAAATCTATAAAAAAATAAATAAATAAAAAAAATATTCAGAAAAGATGCATTAAATTGATTAAAAGAGACAGTAAAGACATTTATGATGCAAATAAATACTGTTCTTTTGAACTTAATATACATCAAAGAATACTGAAAAATGTATCACAGTTTCCACAAAAATTTTAATCAGCACAACTCTAAAAATTCATCACTGATAATAATAAAAAAATGTTTCTTGAGCAGCAAATCAGCATATTAGAATGATTTCTGAAGGAACATGTGACACTGAAAGGATTAGTTCACCCAAAAATGAAAATTCTGTCATTAATTACTCACCCTCATGTCGTTCCACACCCGTAAGACCTTCGTTCATCTTCGGAACACAAATTAAGATATTCTTGATAAAATCAGATGGCTCAATAAGGCCTGCATCGCCAGCAAAAACACTCCCTTTTTCAGTGCATAGAAAGGTACTAAAAACATATTTAAAACTGTTCATGTGAGTACAGTGGTTCAACCTTAATGTTATAAAGCGTCGAGAATACTTTTTGTGCGCCAAAAATAACAAAATAGTGACTTTATTCAACAATATCTAGTGATGGGCAATTTCAAAACACTGCTTCATGAAGCTTCGAAGCTTTACAAATCTTTTGTTTCGAATCAGTGGTTCAGAGCGCCAAAGTCACATGATTTCAGTAAACGAGGCTTTGTTACGTCATAAGTGTTTTGAAACTTCAATGGTTCGCGTGACTTTGGCAGTTTGATTCATGCTCCGAACCACTGGCATTGAAAATATGTTTTTAGTAGCTTTCTGGGCATTGAAAAAAGGAGTGTTCTTGCTGGTGATGCAGGCCTCACTGAACC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU230386 True 1798 lncRNA 0.40 2 4130712 4176770

Neighbor


gene id symbol gene type direction distance location
CI01000047_04105620_04111019 NA coding downstream 19528 4105423 ~ 4111184 (-)
CI01000047_04022011_04032483 NA coding downstream 98046 4020885 ~ 4032666 (-)
CI01000047_03947036_03979744 NA coding downstream 150387 3946306 ~ 3980325 (-)
CI01000047_03873674_03934985 NA coding downstream 195583 3873459 ~ 3935129 (-)
CI01000047_03855710_03868781 NA coding downstream 260908 3855543 ~ 3869804 (-)
CI01000047_04213574_04213976 NA coding upstream 36651 4213409 ~ 4214085 (-)
CI01000047_04285605_04286644 COA3A coding upstream 108457 4285227 ~ 4286694 (-)
CI01000047_04289186_04338565 NA coding upstream 112293 4289063 ~ 4339770 (-)
CI01000047_04345335_04375341 NA coding upstream 168357 4345127 ~ 4375434 (-)
CI01000047_04385029_04397861 NA coding upstream 207777 4384547 ~ 4397861 (-)
G202997 NA non-coding downstream 35820 4094355 ~ 4094892 (-)
G203085 NA non-coding downstream 37091 4093419 ~ 4093621 (-)
G203084 NA non-coding downstream 37301 4093178 ~ 4093411 (-)
G203082 NA non-coding downstream 38777 4091709 ~ 4091935 (-)
G202934 NA non-coding downstream 44605 4075919 ~ 4086107 (-)
G203143 NA non-coding upstream 42627 4219397 ~ 4219733 (-)
G203189 NA non-coding upstream 231703 4408473 ~ 4408827 (-)
G203191 NA non-coding upstream 243389 4420159 ~ 4425359 (-)
G203204 NA non-coding upstream 325435 4502205 ~ 4502522 (-)
G203217 NA non-coding upstream 359571 4536341 ~ 4536570 (-)
G202944 NA other downstream 144310 3985342 ~ 3986402 (-)
G202733 NA other downstream 997060 3132313 ~ 3133652 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other downstream 2415195 1706068 ~ 1744282 (-)
G200472 NA other downstream 3296241 833941 ~ 834471 (-)
CI01000047_00519408_00522108 PYYB other downstream 3608470 519108 ~ 522245 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other upstream 397565 4574335 ~ 4576342 (-)
G203286 NA other upstream 697609 4874379 ~ 4876734 (-)
G203840 NA other upstream 1741738 5918508 ~ 5927344 (-)

Expression



Co-expression Network