G201639


Basic Information

Item Value
gene id G201639
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4540299 ~ 4540501 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU228830
GCAATTTTAACCAAGGCTCCGGGACGTGTGAGGAGTCGCCAGTCAATTGCGTCATACCCTCGGTCTGCCTCGGTTTCCGTTTTTATTTTGTAGAAACCATGGAAACACCAAAGACGCTTTAATATATTACATGTTTTAATAGACAAGGGAACAACTGTTTTAATAAATTTATAGACAGAAAACTAATTGTTGTTATATAGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228830 True 203 lncRNA 0.38 1 4540299 4540501

Neighbor

gene id symbol gene type direction distance location
CI01000047_04471595_04476690 SGCA coding upstream 63082 4471125 ~ 4477217 (+)
CI01000047_04222867_04253291 NA coding upstream 286588 4222682 ~ 4253711 (+)
CI01000047_04214987_04217836 VPS25 coding upstream 321822 4214987 ~ 4218477 (+)
CI01000047_04198702_04207295 FAM57B, FAM57BB coding upstream 332894 4198702 ~ 4207405 (+)
CI01000047_04183386_04192887 MAZ coding upstream 347273 4183386 ~ 4193026 (+)
CI01000047_04582184_04586359 TMEM101 coding downstream 41503 4582004 ~ 4586796 (+)
CI01000047_04606043_04610846 G6PC3 coding downstream 65542 4606043 ~ 4611322 (+)
CI01000047_04663268_04663847 NA coding downstream 121814 4662315 ~ 4663996 (+)
CI01000047_04678392_04690824 NA coding downstream 137491 4677992 ~ 4691097 (+)
CI01000047_04826817_04834995 NA coding downstream 286316 4826817 ~ 4835216 (+)
G201599 NA non-coding upstream 59521 4415813 ~ 4482457 (+)
G201613 NA non-coding upstream 114884 4420184 ~ 4425415 (+)
G201609 NA non-coding upstream 131527 4408518 ~ 4408772 (+)
G201555 NA non-coding upstream 190525 4286779 ~ 4349774 (+)
G201581 NA non-coding upstream 235047 4302574 ~ 4305252 (+)
G201641 NA non-coding downstream 5392 4545893 ~ 4546137 (+)
G201642 NA non-coding downstream 6751 4547252 ~ 4547455 (+)
G201600 NA non-coding downstream 32867 4573368 ~ 4596630 (+)
G201607 NA non-coding downstream 33834 4574335 ~ 4576940 (+)
G201605 NA non-coding downstream 59797 4600298 ~ 4603661 (+)
G201387 NA other upstream 838439 3696516 ~ 3701860 (+)
G201186 NA other upstream 1452112 3018705 ~ 3088187 (+)
G200076 NA other upstream 1962302 2520596 ~ 2577997 (+)
G200003 NA other upstream 2221337 2316863 ~ 2318962 (+)
G202382 NA other downstream 2275216 6815717 ~ 6816118 (+)

Expression


Co-expression Network