G201642


Basic Information

Item Value
gene id G201642
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4547252 ~ 4547455 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU228833
CTAATAATTAAAGAACACACTTATCATCATGATTGCTATCTTACCAGAGATGGAGAAATATCCTACTCCAGTAAGTAAACGTGTTCTTGTGAACCGGTCCCCAAAATGTTGTTACTCAAAAGCGCTTCCCTCCACGTTTTCTGGTGTGCATAGTTTATTTTTACCACGCATGCGCATCTGCGCACCACTGATGTGCACCCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228833 True 204 lncRNA 0.43 1 4547252 4547455

Neighbor

gene id symbol gene type direction distance location
CI01000047_04471595_04476690 SGCA coding upstream 70035 4471125 ~ 4477217 (+)
CI01000047_04222867_04253291 NA coding upstream 293541 4222682 ~ 4253711 (+)
CI01000047_04214987_04217836 VPS25 coding upstream 328775 4214987 ~ 4218477 (+)
CI01000047_04198702_04207295 FAM57B, FAM57BB coding upstream 339847 4198702 ~ 4207405 (+)
CI01000047_04183386_04192887 MAZ coding upstream 354226 4183386 ~ 4193026 (+)
CI01000047_04582184_04586359 TMEM101 coding downstream 34549 4582004 ~ 4586796 (+)
CI01000047_04606043_04610846 G6PC3 coding downstream 58588 4606043 ~ 4611322 (+)
CI01000047_04663268_04663847 NA coding downstream 114860 4662315 ~ 4663996 (+)
CI01000047_04678392_04690824 NA coding downstream 130537 4677992 ~ 4691097 (+)
CI01000047_04826817_04834995 NA coding downstream 279362 4826817 ~ 4835216 (+)
G201641 NA non-coding upstream 1115 4545893 ~ 4546137 (+)
G201639 NA non-coding upstream 6751 4540299 ~ 4540501 (+)
G201599 NA non-coding upstream 66474 4415813 ~ 4482457 (+)
G201613 NA non-coding upstream 121837 4420184 ~ 4425415 (+)
G201609 NA non-coding upstream 138480 4408518 ~ 4408772 (+)
G201600 NA non-coding downstream 25913 4573368 ~ 4596630 (+)
G201607 NA non-coding downstream 26880 4574335 ~ 4576940 (+)
G201605 NA non-coding downstream 52843 4600298 ~ 4603661 (+)
G201658 NA non-coding downstream 72496 4619951 ~ 4623509 (+)
G201669 NA non-coding downstream 100924 4648379 ~ 4724087 (+)
G201387 NA other upstream 845392 3696516 ~ 3701860 (+)
G201186 NA other upstream 1459065 3018705 ~ 3088187 (+)
G200076 NA other upstream 1969255 2520596 ~ 2577997 (+)
G200003 NA other upstream 2228290 2316863 ~ 2318962 (+)
G202382 NA other downstream 2268262 6815717 ~ 6816118 (+)

Expression


Co-expression Network