G201600


Basic Information

Item Value
gene id G201600
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4573368 ~ 4596630 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU228786
ATTTATTTTTTTTTTTACAGTCAGAATTTTTGTTACTTTTATTTTAGAAAATGTCCTTTGTAACGTGTGGCATCTGAAGTCACATTTTGTTTAAAATACAGAACAGACAGACACTTGTAGAACAAACAGCCAAAGAAAAAAAAAAAAAAAAAAAGCATCAAAGTAAATAAAGCTAACAAGCTTTTCTGACTGGTTTGTTTTTTTCTTTTTTTTTTGACAAAATGGAATAGAAGGCGAAGGAGGGATGTAAGAGAGAAGAAAATATGAAAAGCTATCTTTAGATGAAACACAGGAGGAGGAAGAAGGGGCAGAGAGGGGATAAGACACTGTTAGTCAAAGAAACTATGGTTTGTTTGATGGTTGGTGTTTTAAATTATCTTTATAAAGTCTAATTTAGAATGAACTCTTTTCACTCTCATGTTTCTTAAAACATTTTTGCTTTTTTTTTTTGTTTTTTTGTTTCTTTTGTTGATCTTCCAGACCCTAGGCCCTTGGTGCATCCACCCTCGGACTACGACGCAGAGGGGGAGATGAGCGCTGGTTTCGACCAGCTGTTAGGCCCTTGATGCCCGTGGTGCCCTCCCCAGATGAGCCATACCCCCCACTCAGGAGGATAAAGACGAGTCCTTCTGTGTTTGCTGTGCTTGTGTACGTTGCATCGACTTCTGGCTTTCCACATCTCTAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228786 True 688 lncRNA 0.38 2 4573368 4596630

Neighbor

gene id symbol gene type direction distance location
CI01000047_04471595_04476690 SGCA coding upstream 96151 4471125 ~ 4477217 (+)
CI01000047_04222867_04253291 NA coding upstream 319657 4222682 ~ 4253711 (+)
CI01000047_04214987_04217836 VPS25 coding upstream 354891 4214987 ~ 4218477 (+)
CI01000047_04198702_04207295 FAM57B, FAM57BB coding upstream 365963 4198702 ~ 4207405 (+)
CI01000047_04183386_04192887 MAZ coding upstream 380342 4183386 ~ 4193026 (+)
CI01000047_04606043_04610846 G6PC3 coding downstream 9413 4606043 ~ 4611322 (+)
CI01000047_04663268_04663847 NA coding downstream 65685 4662315 ~ 4663996 (+)
CI01000047_04678392_04690824 NA coding downstream 81362 4677992 ~ 4691097 (+)
CI01000047_04826817_04834995 NA coding downstream 230187 4826817 ~ 4835216 (+)
CI01000047_04845691_04876128 LMF1 coding downstream 249061 4845691 ~ 4876128 (+)
G201642 NA non-coding upstream 25913 4547252 ~ 4547455 (+)
G201641 NA non-coding upstream 27231 4545893 ~ 4546137 (+)
G201639 NA non-coding upstream 32867 4540299 ~ 4540501 (+)
G201599 NA non-coding upstream 92590 4415813 ~ 4482457 (+)
G201613 NA non-coding upstream 147953 4420184 ~ 4425415 (+)
G201605 NA non-coding downstream 3668 4600298 ~ 4603661 (+)
G201658 NA non-coding downstream 23321 4619951 ~ 4623509 (+)
G201669 NA non-coding downstream 51749 4648379 ~ 4724087 (+)
G201684 NA non-coding downstream 87701 4684331 ~ 4685358 (+)
G201698 NA non-coding downstream 135696 4732326 ~ 4733589 (+)
G201387 NA other upstream 871508 3696516 ~ 3701860 (+)
G201186 NA other upstream 1485181 3018705 ~ 3088187 (+)
G200076 NA other upstream 1995371 2520596 ~ 2577997 (+)
G200003 NA other upstream 2254406 2316863 ~ 2318962 (+)
G202382 NA other downstream 2219087 6815717 ~ 6816118 (+)

Expression


Co-expression Network