G201799


Basic Information

Item Value
gene id G201799
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4911286 ~ 4912745 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU229003
TGTGTCTTCATTCATCTGCAGAGAAAGGTCAGTGTCTCAGCGCTGTCATCAATATACACCACAATTATGGTAACCATAGTTTCCGCCAAAATACCATAGTTACTGTGGTTATTTATATTACAATAAACCAACCACTGTCATCAAAACTGAAGTGAATCAAAAGCTTCTCACACTGGGACATCCCATTATTATTTTACTGTAATAACTAATGTAATAAATAATGTACTTTTTATTGCAATAGCGAGTTTATGTCTCACAAATTCTGACGTTTTTTTTGCAATAACAAGTTTAAAACTCTGACTTGATTTCTGGCAGCTGTGAAATATAAACTCGCAGTTGTGAGATAAAAGTGGCAGTTACCTTTTTCTATTTTTTTATTTCTAAACAAGCTTCCATAGCCGTCACCATTCTCCTTTTGTGCTTCACAAAAGAAAACAACACATGCCCGTGACCCATTTTATTCCTTTAAATTGTGGAGTGCACCGATTCTCAGCAGATTTCTATGGTTGTACATGCAGAAGTACGAGTTTTCTGTGTTTGTGGAGAAGTGTTTTAGTCAAGGACTCTCATTCATCTGTCAGGATCTCTCATTCCACACTTTAGTCATTCAAACAGCTAGTTTTAATGTCAAGGTCTATCTGATAACATCAGCTGCGTCTCTCCAGACAGGTTGGTAATTGGAAAATGGAAAGTCAGAATAAAAGATCCATGTTTCCTTTGCTACACTTAAATTTGCCCATCAGTTCAGTGTTGATTTGTTTACCATTTGTTCAATATTATTCTTTCGTCAGCCGGATTATCATTTAACACGCTCAGCTTAGCAGAATAAACTGACTGCAGACTCTTTAATGTGTGTCAGTCCATTAACCTGCGAATGCAATGAGAGTTAATTATCAGCGTGTGTTTGTAACTCGCTCTTCCTGCCTTTGGTTGAAGAATACAGTGAATATTTACCTTGATACACATAATTACCTCTTTAAGGGAAATGGTTAATTACTCAAAGGTGCGACCTAACCTAATGAGCAAATGACAGAGGTCCTGTTAGCAAGAAATGCTTCCAGTGTCACTGAGTTTAATGAGAAAGTGTAATCACGGCATGGTTCGGTGCAGCGCTCTGTGTTCTGTAAGACCTAGTGTTATTGATTGAGCTGAATATATGTTTAAAATGAAAGTGCAAAGATGGTGTCCTATTTTAGGGTGTCATAATTGACAAGTATTCTTCCTGATTTTCATTCTGACTTTACCACAAAAAATATACTTTTTAATTATACTCTTTTATCTTGTTATCTGTCATTGTCCTGGTAGCAGGACACTTTCCATGCTTTTTTTTATTATTGCATATCACAGGTTTTAGTAATTATCGAAATTGGACTGTGTTACCATTAAAAACGGTGCTTTAAAACCAATTAGAGGGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229003 True 1417 lncRNA 0.36 2 4911286 4912745

Neighbor

gene id symbol gene type direction distance location
CI01000047_04890965_04891981 NA coding upstream 19155 4890965 ~ 4892131 (+)
CI01000047_04845691_04876128 LMF1 coding upstream 35158 4845691 ~ 4876128 (+)
CI01000047_04826817_04834995 NA coding upstream 76070 4826817 ~ 4835216 (+)
CI01000047_04678392_04690824 NA coding upstream 220189 4677992 ~ 4691097 (+)
CI01000047_04663268_04663847 NA coding upstream 247290 4662315 ~ 4663996 (+)
CI01000047_05058628_05074146 NA coding downstream 145598 5058343 ~ 5074374 (+)
CI01000047_05080583_05091592 NA coding downstream 166589 5079334 ~ 5091965 (+)
CI01000047_05104311_05105437 RASD1 coding downstream 191456 5104201 ~ 5105897 (+)
CI01000047_05159134_05162486 NA coding downstream 244460 5157205 ~ 5162595 (+)
CI01000047_05185698_05212150 USP22 coding downstream 272953 5185698 ~ 5212224 (+)
G201773 NA non-coding upstream 122723 4787934 ~ 4788563 (+)
G201698 NA non-coding upstream 177697 4732326 ~ 4733589 (+)
G201669 NA non-coding upstream 187199 4648379 ~ 4724087 (+)
G201684 NA non-coding upstream 225928 4684331 ~ 4685358 (+)
G201658 NA non-coding upstream 287777 4619951 ~ 4623509 (+)
G201722 NA non-coding downstream 34885 4947630 ~ 4961291 (+)
G201728 NA non-coding downstream 48700 4961445 ~ 4965850 (+)
G201856 NA non-coding downstream 159942 5072687 ~ 5073157 (+)
G201847 NA non-coding downstream 184840 5097585 ~ 5097981 (+)
G201848 NA non-coding downstream 195779 5108524 ~ 5109175 (+)
G201599 NA other upstream 428829 4415813 ~ 4482457 (+)
G201387 NA other upstream 1209426 3696516 ~ 3701860 (+)
G201186 NA other upstream 1823099 3018705 ~ 3088187 (+)
G200076 NA other upstream 2333289 2520596 ~ 2577997 (+)
G200003 NA other upstream 2592324 2316863 ~ 2318962 (+)
G202382 NA other downstream 1902972 6815717 ~ 6816118 (+)

Expression


Co-expression Network