Gene
RNA
| Item | Value |
|---|---|
| gene id | G203355 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000047 |
| NCBI id | null |
| chromosome length | 7523058 |
| location | 4989157 ~ 4989456 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU230792 | True | 300 | lncRNA | 0.39 | 1 | 4989157 | 4989456 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000047_04840115_04844233 | SOX8, SOX8A | coding | downstream | 144924 | 4839563 ~ 4844233 (-) |
| CI01000047_04790377_04795864 | CNTD1 | coding | downstream | 192841 | 4790224 ~ 4796316 (-) |
| CI01000047_04703391_04706693 | NA | coding | downstream | 282464 | 4703038 ~ 4706693 (-) |
| CI01000047_04613815_04652751 | TANC2 | coding | downstream | 336406 | 4613815 ~ 4652751 (-) |
| CI01000047_04596548_04605172 | LSM12A, LSM12, LSM12B | coding | downstream | 383985 | 4595980 ~ 4605172 (-) |
| CI01000047_05108733_05109209 | MED9 | coding | upstream | 118548 | 5108004 ~ 5109256 (-) |
| CI01000047_05151314_05157285 | NT5M | coding | upstream | 160263 | 5149719 ~ 5158394 (-) |
| CI01000047_05219313_05222967 | NA | coding | upstream | 229734 | 5219190 ~ 5222990 (-) |
| CI01000047_05235089_05236228 | SSTR2A | coding | upstream | 244688 | 5234144 ~ 5236273 (-) |
| CI01000047_05247473_05248489 | SSTR5 | coding | upstream | 257507 | 5246963 ~ 5248681 (-) |
| G203303 | NA | non-coding | downstream | 10422 | 4974296 ~ 4978735 (-) |
| G203323 | NA | non-coding | downstream | 40890 | 4935506 ~ 4948267 (-) |
| G203298 | NA | non-coding | downstream | 106254 | 4882653 ~ 4882903 (-) |
| G203258 | NA | non-coding | downstream | 186931 | 4801897 ~ 4802226 (-) |
| G203221 | NA | non-coding | downstream | 438900 | 4550020 ~ 4550257 (-) |
| G203356 | NA | non-coding | upstream | 1304 | 4990760 ~ 4990990 (-) |
| G203359 | NA | non-coding | upstream | 15016 | 5004472 ~ 5004977 (-) |
| G203437 | NA | non-coding | upstream | 106630 | 5096086 ~ 5096681 (-) |
| G203442 | NA | non-coding | upstream | 110042 | 5099498 ~ 5099712 (-) |
| G203446 | NA | non-coding | upstream | 122910 | 5112366 ~ 5113194 (-) |
| G203286 | NA | other | downstream | 112423 | 4874379 ~ 4876734 (-) |
| CI01000047_04575184_04576337 | GNGT2B, GNGT2 | other | downstream | 412192 | 4574335 ~ 4576342 (-) |
| CI01000047_04285605_04286644 | COA3A | other | downstream | 702476 | 4285227 ~ 4286694 (-) |
| CI01000047_04213574_04213976 | NA | other | downstream | 774727 | 4213409 ~ 4214085 (-) |
| G202944 | NA | other | downstream | 1002755 | 3985342 ~ 3986402 (-) |
| G203840 | NA | other | upstream | 929052 | 5918508 ~ 5927344 (-) |
| G203881 | NA | other | upstream | 1053797 | 6043253 ~ 6043789 (-) |
