G201856


Basic Information

Item Value
gene id G201856
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 5072687 ~ 5073157 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU229064
AAGCAATGTGTGCAATTGGAAAACGACTTAAAATGATGCAAGAATCAGATTTATTTATACCAAACTTACGCATTTAGATGTTCGTCATGCTAGCACTATGTCAGCTTTTACTGGACATTTTACAAAGGAGAAAGCAATTGGTGGACTGAAACATTTATTGTGCCTTTGCCATTATAAAAGCTGTGTATGTCGTGCCAAAATCACAAAATTACAGGTGCTTTTTTTTTTTTTTTTTTTTTTTCGTATTGTTTGTGTTTTAGTATAGTGTTGCGTCAGGGTTGTTTAGAATGCTGTTTAAATTCAGTAAAGAAGTGGAACTAAAAATAATTGAAATTCAATTAAATCCATAACTGTAATTTTTAGATTAAAATATTTTGAAATTTAGATAGATAGACAGATAGATAGACAGACAGACAGACAGAGATAGATAGACAGAAGGATAGATGGATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229064 True 451 lncRNA 0.31 2 5072687 5073157

Neighbor

gene id symbol gene type direction distance location
CI01000047_04890965_04891981 NA coding upstream 180556 4890965 ~ 4892131 (+)
CI01000047_04845691_04876128 LMF1 coding upstream 196559 4845691 ~ 4876128 (+)
CI01000047_04826817_04834995 NA coding upstream 237471 4826817 ~ 4835216 (+)
CI01000047_04678392_04690824 NA coding upstream 381590 4677992 ~ 4691097 (+)
CI01000047_04663268_04663847 NA coding upstream 408691 4662315 ~ 4663996 (+)
CI01000047_05080583_05091592 NA coding downstream 6177 5079334 ~ 5091965 (+)
CI01000047_05104311_05105437 RASD1 coding downstream 31044 5104201 ~ 5105897 (+)
CI01000047_05159134_05162486 NA coding downstream 84048 5157205 ~ 5162595 (+)
CI01000047_05185698_05212150 USP22 coding downstream 112541 5185698 ~ 5212224 (+)
CI01000047_05267807_05269108 NA coding downstream 194650 5267807 ~ 5269150 (+)
G201728 NA non-coding upstream 106837 4961445 ~ 4965850 (+)
G201722 NA non-coding upstream 111396 4947630 ~ 4961291 (+)
G201799 NA non-coding upstream 159942 4911286 ~ 4912745 (+)
G201773 NA non-coding upstream 284124 4787934 ~ 4788563 (+)
G201698 NA non-coding upstream 339098 4732326 ~ 4733589 (+)
G201847 NA non-coding downstream 24428 5097585 ~ 5097981 (+)
G201848 NA non-coding downstream 35367 5108524 ~ 5109175 (+)
G201863 NA non-coding downstream 36831 5109988 ~ 5110202 (+)
G201869 NA non-coding downstream 46193 5119350 ~ 5119644 (+)
CI01000047_05468225_05478050 NA non-coding downstream 320274 5467089 ~ 5479506 (+)
G201599 NA other upstream 590230 4415813 ~ 4482457 (+)
G201387 NA other upstream 1370827 3696516 ~ 3701860 (+)
G201186 NA other upstream 1984500 3018705 ~ 3088187 (+)
G200076 NA other upstream 2494690 2520596 ~ 2577997 (+)
G200003 NA other upstream 2753725 2316863 ~ 2318962 (+)
G202382 NA other downstream 1742560 6815717 ~ 6816118 (+)

Expression


Co-expression Network