G203446


Basic Information

Item Value
gene id G203446
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 5112366 ~ 5113194 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU230894
CACACGCGCACAGGTTTGTTTTTGTAAATTGTGGGGACATTCCATAGGCGTAATGGTTTTTATACTGTACAAACCGTATTTTCTATCCCCCTACACTACCCCTAAACCTACCCATCACAGGAAACTGTGCACATTTTTACTTTCTCAAAACAACTCATTCTGTATGATTTATAAGCCTTTTGAAAAATGGGGACATGGGGTAATGTCCTCATAAGTCACTCTCTCCTTGTAATACCTATGTCATACCCATGTCATTATACAAATTTGTGTCCTGATATGTCACAAAAACAAACACACACACACACACACACACAGACACACGCAC
>TU230893
CACACGCGCACAGGTTTGTTTTTGTAAATTGTGGGGACATTCCATAGGCGTAATGGTTTTTATACTGTACAAACCGTATTTTCTATCCCCCTACACTACCCCTAAACCTACCCATCACAGGAAACTGTGCACATTTTTACTTTCTCAAAACAACTCATTCTGTATGATTTATAAGCCTTTTGAAAAATGGGGACATGGGGTAATGTCCTCATAAGTCACTCTCTCCTTGTAATACCTATGTCATACCCATGTCATTATACAAATTTGTGTCCTGATATGTCACAAAAACAAACACACACGCACAGATACACACACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230894 False 325 lncRNA 0.40 3 5112366 5113194
TU230893 True 317 lncRNA 0.39 2 5112622 5113194

Neighbor

gene id symbol gene type direction distance location
CI01000047_05108733_05109209 MED9 coding downstream 3110 5108004 ~ 5109256 (-)
CI01000047_04840115_04844233 SOX8, SOX8A coding downstream 268133 4839563 ~ 4844233 (-)
CI01000047_04790377_04795864 CNTD1 coding downstream 316050 4790224 ~ 4796316 (-)
CI01000047_04703391_04706693 NA coding downstream 405673 4703038 ~ 4706693 (-)
CI01000047_04613815_04652751 TANC2 coding downstream 459615 4613815 ~ 4652751 (-)
CI01000047_05151314_05157285 NT5M coding upstream 36525 5149719 ~ 5158394 (-)
CI01000047_05219313_05222967 NA coding upstream 105996 5219190 ~ 5222990 (-)
CI01000047_05235089_05236228 SSTR2A coding upstream 120950 5234144 ~ 5236273 (-)
CI01000047_05247473_05248489 SSTR5 coding upstream 133769 5246963 ~ 5248681 (-)
CI01000047_05546059_05547988 SOX9A coding upstream 431587 5544781 ~ 5548356 (-)
G203442 NA non-coding downstream 12654 5099498 ~ 5099712 (-)
G203437 NA non-coding downstream 15685 5096086 ~ 5096681 (-)
G203359 NA non-coding downstream 107389 5004472 ~ 5004977 (-)
G203356 NA non-coding downstream 121376 4990760 ~ 4990990 (-)
G203355 NA non-coding downstream 122910 4989157 ~ 4989456 (-)
G203429 NA non-coding upstream 8732 5121926 ~ 5164869 (-)
G203516 NA non-coding upstream 182276 5295470 ~ 5317664 (-)
G203417 NA non-coding upstream 273898 5387092 ~ 5388043 (-)
G203574 NA non-coding upstream 277528 5390722 ~ 5391012 (-)
G203576 NA non-coding upstream 279904 5393098 ~ 5393337 (-)
G203286 NA other downstream 235632 4874379 ~ 4876734 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other downstream 535401 4574335 ~ 4576342 (-)
CI01000047_04285605_04286644 COA3A other downstream 825685 4285227 ~ 4286694 (-)
CI01000047_04213574_04213976 NA other downstream 897936 4213409 ~ 4214085 (-)
G202944 NA other downstream 1125964 3985342 ~ 3986402 (-)
G203840 NA other upstream 805314 5918508 ~ 5927344 (-)
G203881 NA other upstream 930059 6043253 ~ 6043789 (-)

Expression


Co-expression Network