Gene
RNA
| Item | Value |
|---|---|
| gene id | G203576 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000047 |
| NCBI id | null |
| chromosome length | 7523058 |
| location | 5393098 ~ 5393337 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU231053 | True | 240 | lncRNA | 0.26 | 1 | 5393098 | 5393337 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000047_05247473_05248489 | SSTR5 | coding | downstream | 144417 | 5246963 ~ 5248681 (-) |
| CI01000047_05235089_05236228 | SSTR2A | coding | downstream | 156825 | 5234144 ~ 5236273 (-) |
| CI01000047_05219313_05222967 | NA | coding | downstream | 170108 | 5219190 ~ 5222990 (-) |
| CI01000047_05151314_05157285 | NT5M | coding | downstream | 234704 | 5149719 ~ 5158394 (-) |
| CI01000047_05108733_05109209 | MED9 | coding | downstream | 283842 | 5108004 ~ 5109256 (-) |
| CI01000047_05546059_05547988 | SOX9A | coding | upstream | 151444 | 5544781 ~ 5548356 (-) |
| CI01000047_05805272_05807974 | NA | coding | upstream | 411935 | 5805272 ~ 5807974 (-) |
| CI01000047_05862382_05868129 | NA | coding | upstream | 468488 | 5861825 ~ 5868679 (-) |
| CI01000047_05869347_05869519 | NA | coding | upstream | 475947 | 5869284 ~ 5869519 (-) |
| CI01000047_05958264_05971163 | MAPK8B, MAPK8, MAPK8A | coding | upstream | 564554 | 5957891 ~ 5971163 (-) |
| G203574 | NA | non-coding | downstream | 2086 | 5390722 ~ 5391012 (-) |
| G203417 | NA | non-coding | downstream | 5055 | 5387092 ~ 5388043 (-) |
| G203516 | NA | non-coding | downstream | 75434 | 5295470 ~ 5317664 (-) |
| G203429 | NA | non-coding | downstream | 228229 | 5121926 ~ 5164869 (-) |
| G203446 | NA | non-coding | downstream | 279904 | 5112366 ~ 5113194 (-) |
| G203709 | NA | non-coding | upstream | 245106 | 5638443 ~ 5638653 (-) |
| G203712 | NA | non-coding | upstream | 249408 | 5642745 ~ 5642967 (-) |
| G203713 | NA | non-coding | upstream | 250998 | 5644335 ~ 5644537 (-) |
| G203719 | NA | non-coding | upstream | 259408 | 5652745 ~ 5652958 (-) |
| G203720 | NA | non-coding | upstream | 259680 | 5653017 ~ 5654088 (-) |
| G203286 | NA | other | downstream | 516364 | 4874379 ~ 4876734 (-) |
| CI01000047_04575184_04576337 | GNGT2B, GNGT2 | other | downstream | 816133 | 4574335 ~ 4576342 (-) |
| CI01000047_04285605_04286644 | COA3A | other | downstream | 1106417 | 4285227 ~ 4286694 (-) |
| CI01000047_04213574_04213976 | NA | other | downstream | 1178668 | 4213409 ~ 4214085 (-) |
| G202944 | NA | other | downstream | 1406696 | 3985342 ~ 3986402 (-) |
| G203840 | NA | other | upstream | 525171 | 5918508 ~ 5927344 (-) |
| G203881 | NA | other | upstream | 649916 | 6043253 ~ 6043789 (-) |
