G201959


Basic Information

Item Value
gene id G201959
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 5525802 ~ 5625106 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU229174
GTGTGTGTCCCTTTAAATGCAAATGAGCTGCTGCTCCCGGCCCCCTTTCCAGAAGAGGGCGGGGCGGAGCTTTAACAGCTCACGCTTCGGTTGCTCAACAACAACAAAGCTGGAGAATCTCACGCAGCCAAAATGAGGATTGTCAGTAACGGTGTTCAGCCTTACATTGTTCAAACCAGAGTCGACACTGATGGAGAGACTCAGGAAGAAGTTACAACTTTTAGAATGAAACTGGACGTTTCTGAATGGTTAGTGGATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229174 True 261 lncRNA 0.48 2 5525802 5625106

Neighbor

gene id symbol gene type direction distance location
CI01000047_05468225_05478050 NA coding upstream 47182 5467089 ~ 5479506 (+)
CI01000047_05438344_05441756 NA coding upstream 83515 5435541 ~ 5442287 (+)
CI01000047_05380032_05387598 SLC39A11 coding upstream 137550 5379365 ~ 5388252 (+)
CI01000047_05339574_05340802 NA coding upstream 184930 5337685 ~ 5340872 (+)
CI01000047_05315990_05318854 NA coding upstream 205391 5315584 ~ 5320411 (+)
CI01000047_05856549_05859800 NA coding downstream 231009 5856115 ~ 5859942 (+)
CI01000047_05887388_05899310 VSTM4B coding downstream 261116 5886222 ~ 5899612 (+)
CI01000047_05911739_05912506 LRRC18B, LRRC18 coding downstream 286533 5911639 ~ 5914944 (+)
CI01000047_05927095_05951348 ARHGAP22 coding downstream 301989 5927095 ~ 5951356 (+)
CI01000047_05983785_06007139 FRMPD2 coding downstream 358679 5983785 ~ 6007342 (+)
G201869 NA non-coding upstream 406158 5119350 ~ 5119644 (+)
G201863 NA non-coding upstream 415600 5109988 ~ 5110202 (+)
G201848 NA non-coding upstream 416627 5108524 ~ 5109175 (+)
G201847 NA non-coding upstream 427821 5097585 ~ 5097981 (+)
G202021 NA non-coding downstream 7109 5632215 ~ 5632418 (+)
G202030 NA non-coding downstream 25260 5650366 ~ 5650573 (+)
G202033 NA non-coding downstream 29642 5654748 ~ 5655020 (+)
G202111 NA non-coding downstream 236781 5861887 ~ 5869731 (+)
G202113 NA non-coding downstream 254718 5879824 ~ 5882797 (+)
G201599 NA other upstream 1043345 4415813 ~ 4482457 (+)
G201387 NA other upstream 1823942 3696516 ~ 3701860 (+)
G201186 NA other upstream 2437615 3018705 ~ 3088187 (+)
G200076 NA other upstream 2947805 2520596 ~ 2577997 (+)
G200003 NA other upstream 3206840 2316863 ~ 2318962 (+)
G202382 NA other downstream 1190611 6815717 ~ 6816118 (+)

Expression


Co-expression Network