Gene
RNA
| Item | Value |
|---|---|
| gene id | G203752 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000047 |
| NCBI id | null |
| chromosome length | 7523058 |
| location | 5750801 ~ 5953288 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU231237 | True | 254 | lncRNA | 0.39 | 2 | 5750801 | 5953288 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000047_05546059_05547988 | SOX9A | coding | downstream | 202445 | 5544781 ~ 5548356 (-) |
| CI01000047_05247473_05248489 | SSTR5 | coding | downstream | 502120 | 5246963 ~ 5248681 (-) |
| CI01000047_05235089_05236228 | SSTR2A | coding | downstream | 514528 | 5234144 ~ 5236273 (-) |
| CI01000047_05219313_05222967 | NA | coding | downstream | 527811 | 5219190 ~ 5222990 (-) |
| CI01000047_05151314_05157285 | NT5M | coding | downstream | 592407 | 5149719 ~ 5158394 (-) |
| CI01000047_05958264_05971163 | MAPK8B, MAPK8, MAPK8A | coding | upstream | 4603 | 5957891 ~ 5971163 (-) |
| CI01000047_06139714_06142702 | UBTD1, UBTD1A, UBTD1B | coding | upstream | 186329 | 6139617 ~ 6142702 (-) |
| CI01000047_06184569_06194319 | ZDHHC16 | coding | upstream | 230784 | 6184072 ~ 6195664 (-) |
| CI01000047_06216778_06234561 | FAM20A | coding | upstream | 262338 | 6215626 ~ 6235272 (-) |
| CI01000047_06242992_06270894 | NA | coding | upstream | 289439 | 6242727 ~ 6272791 (-) |
| G203720 | NA | non-coding | downstream | 96713 | 5653017 ~ 5654088 (-) |
| G203719 | NA | non-coding | downstream | 97843 | 5652745 ~ 5652958 (-) |
| G203713 | NA | non-coding | downstream | 106264 | 5644335 ~ 5644537 (-) |
| G203712 | NA | non-coding | downstream | 107834 | 5642745 ~ 5642967 (-) |
| G203709 | NA | non-coding | downstream | 112148 | 5638443 ~ 5638653 (-) |
| G203853 | NA | non-coding | upstream | 22622 | 5975910 ~ 5976256 (-) |
| G203857 | NA | non-coding | upstream | 27512 | 5980800 ~ 5981561 (-) |
| G203858 | NA | non-coding | upstream | 29456 | 5982744 ~ 5983064 (-) |
| G203859 | NA | non-coding | upstream | 31293 | 5984581 ~ 5984887 (-) |
| G203861 | NA | non-coding | upstream | 38489 | 5991777 ~ 5992089 (-) |
| G203286 | NA | other | downstream | 874067 | 4874379 ~ 4876734 (-) |
| CI01000047_04575184_04576337 | GNGT2B, GNGT2 | other | downstream | 1173836 | 4574335 ~ 4576342 (-) |
| CI01000047_04285605_04286644 | COA3A | other | downstream | 1464120 | 4285227 ~ 4286694 (-) |
| CI01000047_04213574_04213976 | NA | other | downstream | 1536371 | 4213409 ~ 4214085 (-) |
| G202944 | NA | other | downstream | 1764399 | 3985342 ~ 3986402 (-) |
| G203881 | NA | other | upstream | 89965 | 6043253 ~ 6043789 (-) |
