G203858



Basic Information


Item Value
gene id G203858
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 5982744 ~ 5983064 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU231363
TTAGAAGTAAAAATGAAACATTTAGAAGTAATTCAAGTGTAATCGACCAGTCTCTGTTCTCCTGTTTCCACCGTAACGGCGCTGGATCTCGTGCCGGAGATGACTCGCGTTCGGCGGGGGAACTGATAACTTCAGACCACCGCCTGCGTTTCACTCATAGCCGAAAAATGCTGTGACTGACTCCATAACCTGTCCATAAATAATCAGTGTACGATTCTGAGAACATATTTTAACATCCTAAGTATTTATATTCTATATCTTTTTGAATAAAATCATAACATTTTATGCAAGGCATCAGGCGTTTCCATCACGTGAAAAGAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU231363 True 321 lncRNA 0.40 1 5982744 5983064

Neighbor


gene id symbol gene type direction distance location
CI01000047_05958264_05971163 MAPK8B, MAPK8, MAPK8A coding downstream 11581 5957891 ~ 5971163 (-)
CI01000047_05869347_05869519 NA coding downstream 113225 5869284 ~ 5869519 (-)
CI01000047_05862382_05868129 NA coding downstream 114065 5861825 ~ 5868679 (-)
CI01000047_05805272_05807974 NA coding downstream 174770 5805272 ~ 5807974 (-)
CI01000047_05546059_05547988 SOX9A coding downstream 434388 5544781 ~ 5548356 (-)
CI01000047_06139714_06142702 UBTD1, UBTD1A, UBTD1B coding upstream 156553 6139617 ~ 6142702 (-)
CI01000047_06184569_06194319 ZDHHC16 coding upstream 201008 6184072 ~ 6195664 (-)
CI01000047_06216778_06234561 FAM20A coding upstream 232562 6215626 ~ 6235272 (-)
CI01000047_06242992_06270894 NA coding upstream 259663 6242727 ~ 6272791 (-)
CI01000047_06302441_06309359 DCXR coding upstream 319377 6302441 ~ 6309359 (-)
G203857 NA non-coding downstream 1183 5980800 ~ 5981561 (-)
G203853 NA non-coding downstream 6488 5975910 ~ 5976256 (-)
G203752 NA non-coding downstream 29456 5750801 ~ 5953288 (-)
G203764 NA non-coding downstream 178586 5803136 ~ 5804158 (-)
G203720 NA non-coding downstream 328656 5653017 ~ 5654088 (-)
G203859 NA non-coding upstream 1517 5984581 ~ 5984887 (-)
G203861 NA non-coding upstream 8713 5991777 ~ 5992089 (-)
G203876 NA non-coding upstream 46525 6029589 ~ 6029905 (-)
G203878 NA non-coding upstream 51972 6035036 ~ 6035320 (-)
G203884 NA non-coding upstream 72405 6055469 ~ 6056471 (-)
G203840 NA other downstream 55400 5918508 ~ 5927344 (-)
G203286 NA other downstream 1106010 4874379 ~ 4876734 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other downstream 1405779 4574335 ~ 4576342 (-)
CI01000047_04285605_04286644 COA3A other downstream 1696063 4285227 ~ 4286694 (-)
CI01000047_04213574_04213976 NA other downstream 1768314 4213409 ~ 4214085 (-)
G203881 NA other upstream 60189 6043253 ~ 6043789 (-)

Expression



Co-expression Network