Gene
RNA
| Item | Value |
|---|---|
| gene id | G202175 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000047 |
| NCBI id | null |
| chromosome length | 7523058 |
| location | 5989459 ~ 5989811 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| 7,8-dihydro-8-oxoguanine triphosphatase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU229405 | True | 353 | lncRNA | 0.39 | 1 | 5989459 | 5989811 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000047_05927095_05951348 | ARHGAP22 | coding | upstream | 38103 | 5927095 ~ 5951356 (+) |
| CI01000047_05911739_05912506 | LRRC18B, LRRC18 | coding | upstream | 74515 | 5911639 ~ 5914944 (+) |
| CI01000047_05887388_05899310 | VSTM4B | coding | upstream | 89847 | 5886222 ~ 5899612 (+) |
| CI01000047_05856549_05859800 | NA | coding | upstream | 129517 | 5856115 ~ 5859942 (+) |
| CI01000047_05468225_05478050 | NA | coding | upstream | 510839 | 5467089 ~ 5479506 (+) |
| CI01000047_06045320_06049402 | NA | coding | downstream | 54891 | 6044702 ~ 6049687 (+) |
| CI01000047_06051877_06053164 | NA | coding | downstream | 61454 | 6051265 ~ 6053995 (+) |
| CI01000047_06058032_06060776 | RBP3, IRBP | coding | downstream | 68221 | 6058032 ~ 6060994 (+) |
| CI01000047_06062818_06067865 | IRBP | coding | downstream | 71374 | 6061185 ~ 6068241 (+) |
| CI01000047_06086322_06106616 | NA | coding | downstream | 96511 | 6086322 ~ 6106722 (+) |
| G202174 | NA | non-coding | upstream | 2625 | 5986531 ~ 5986834 (+) |
| G202126 | NA | non-coding | upstream | 12414 | 5976654 ~ 5977045 (+) |
| G202125 | NA | non-coding | upstream | 13193 | 5975986 ~ 5976266 (+) |
| G202063 | NA | non-coding | upstream | 31055 | 5955239 ~ 5958404 (+) |
| G202113 | NA | non-coding | upstream | 106662 | 5879824 ~ 5882797 (+) |
| G202186 | NA | non-coding | downstream | 49144 | 6038955 ~ 6039154 (+) |
| G202189 | NA | non-coding | downstream | 52608 | 6042419 ~ 6042738 (+) |
| G202191 | NA | non-coding | downstream | 65178 | 6054989 ~ 6055250 (+) |
| G202187 | NA | non-coding | downstream | 144061 | 6133872 ~ 6134088 (+) |
| G201599 | NA | other | upstream | 1507002 | 4415813 ~ 4482457 (+) |
| G201387 | NA | other | upstream | 2287599 | 3696516 ~ 3701860 (+) |
| G201186 | NA | other | upstream | 2901272 | 3018705 ~ 3088187 (+) |
| G200076 | NA | other | upstream | 3411462 | 2520596 ~ 2577997 (+) |
| G200003 | NA | other | upstream | 3670497 | 2316863 ~ 2318962 (+) |
| G202382 | NA | other | downstream | 825906 | 6815717 ~ 6816118 (+) |
