Gene
RNA
| Item | Value |
|---|---|
| gene id | G203878 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000047 |
| NCBI id | null |
| chromosome length | 7523058 |
| location | 6035036 ~ 6035320 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU231387 | True | 285 | lncRNA | 0.28 | 1 | 6035036 | 6035320 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000047_05958264_05971163 | MAPK8B, MAPK8, MAPK8A | coding | downstream | 63873 | 5957891 ~ 5971163 (-) |
| CI01000047_05869347_05869519 | NA | coding | downstream | 165517 | 5869284 ~ 5869519 (-) |
| CI01000047_05862382_05868129 | NA | coding | downstream | 166357 | 5861825 ~ 5868679 (-) |
| CI01000047_05805272_05807974 | NA | coding | downstream | 227062 | 5805272 ~ 5807974 (-) |
| CI01000047_05546059_05547988 | SOX9A | coding | downstream | 486680 | 5544781 ~ 5548356 (-) |
| CI01000047_06139714_06142702 | UBTD1, UBTD1A, UBTD1B | coding | upstream | 104297 | 6139617 ~ 6142702 (-) |
| CI01000047_06184569_06194319 | ZDHHC16 | coding | upstream | 148752 | 6184072 ~ 6195664 (-) |
| CI01000047_06216778_06234561 | FAM20A | coding | upstream | 180306 | 6215626 ~ 6235272 (-) |
| CI01000047_06242992_06270894 | NA | coding | upstream | 207407 | 6242727 ~ 6272791 (-) |
| CI01000047_06302441_06309359 | DCXR | coding | upstream | 267121 | 6302441 ~ 6309359 (-) |
| G203876 | NA | non-coding | downstream | 5131 | 6029589 ~ 6029905 (-) |
| G203861 | NA | non-coding | downstream | 42947 | 5991777 ~ 5992089 (-) |
| G203859 | NA | non-coding | downstream | 50149 | 5984581 ~ 5984887 (-) |
| G203858 | NA | non-coding | downstream | 51972 | 5982744 ~ 5983064 (-) |
| G203857 | NA | non-coding | downstream | 53475 | 5980800 ~ 5981561 (-) |
| G203884 | NA | non-coding | upstream | 20149 | 6055469 ~ 6056471 (-) |
| G203888 | NA | non-coding | upstream | 26210 | 6061530 ~ 6061952 (-) |
| G203855 | NA | non-coding | upstream | 99397 | 6134717 ~ 6137099 (-) |
| G204005 | NA | non-coding | upstream | 309914 | 6345234 ~ 6345473 (-) |
| G204010 | NA | non-coding | upstream | 331055 | 6366375 ~ 6366652 (-) |
| G203840 | NA | other | downstream | 107692 | 5918508 ~ 5927344 (-) |
| G203286 | NA | other | downstream | 1158302 | 4874379 ~ 4876734 (-) |
| CI01000047_04575184_04576337 | GNGT2B, GNGT2 | other | downstream | 1458071 | 4574335 ~ 4576342 (-) |
| CI01000047_04285605_04286644 | COA3A | other | downstream | 1748355 | 4285227 ~ 4286694 (-) |
| CI01000047_04213574_04213976 | NA | other | downstream | 1820606 | 4213409 ~ 4214085 (-) |
| G203881 | NA | other | upstream | 7933 | 6043253 ~ 6043789 (-) |
