G202189


Basic Information

Item Value
gene id G202189
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 6042419 ~ 6042738 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU229419
TGACTGCTTAACCCTTGTGCGTCAATTAAAAAAAGTTACACATAGGTCCATAGTGGACAAAAATGTCAGTGTCTCATTTTAAAGAAGACCCTTGGCAGAATCTTGCTGAAGTAAAAAAAAAAAAAAAAAATTAAAAAGTGAAACAAAAGCAAAAAAAAACTCGAATTCCAGAAATGTTGGGACATTTTTTAAATTTGAATAAAATGAAAACTAAAAGACTTTCAGATCACATGAGCCAATATTTTATTCACAATAGAACATAGATAACATATCAAATGTTTAAATTTGATGCCTGCTACAGGTCTCAAAATAGTTAGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229419 True 320 lncRNA 0.30 1 6042419 6042738

Neighbor

gene id symbol gene type direction distance location
CI01000047_05983785_06007139 FRMPD2 coding upstream 35077 5983785 ~ 6007342 (+)
CI01000047_05927095_05951348 ARHGAP22 coding upstream 91063 5927095 ~ 5951356 (+)
CI01000047_05911739_05912506 LRRC18B, LRRC18 coding upstream 127475 5911639 ~ 5914944 (+)
CI01000047_05887388_05899310 VSTM4B coding upstream 142807 5886222 ~ 5899612 (+)
CI01000047_05856549_05859800 NA coding upstream 182477 5856115 ~ 5859942 (+)
CI01000047_06045320_06049402 NA coding downstream 1964 6044702 ~ 6049687 (+)
CI01000047_06051877_06053164 NA coding downstream 8527 6051265 ~ 6053995 (+)
CI01000047_06058032_06060776 RBP3, IRBP coding downstream 15294 6058032 ~ 6060994 (+)
CI01000047_06062818_06067865 IRBP coding downstream 18447 6061185 ~ 6068241 (+)
CI01000047_06086322_06106616 NA coding downstream 43584 6086322 ~ 6106722 (+)
G202186 NA non-coding upstream 3265 6038955 ~ 6039154 (+)
G202175 NA non-coding upstream 52608 5989459 ~ 5989811 (+)
G202174 NA non-coding upstream 55585 5986531 ~ 5986834 (+)
G202126 NA non-coding upstream 65374 5976654 ~ 5977045 (+)
G202125 NA non-coding upstream 66153 5975986 ~ 5976266 (+)
G202191 NA non-coding downstream 12251 6054989 ~ 6055250 (+)
G202187 NA non-coding downstream 91134 6133872 ~ 6134088 (+)
G202138 NA non-coding downstream 91990 6134728 ~ 6137136 (+)
G202205 NA non-coding downstream 106091 6148829 ~ 6149322 (+)
G201599 NA other upstream 1559962 4415813 ~ 4482457 (+)
G201387 NA other upstream 2340559 3696516 ~ 3701860 (+)
G201186 NA other upstream 2954232 3018705 ~ 3088187 (+)
G200076 NA other upstream 3464422 2520596 ~ 2577997 (+)
G200003 NA other upstream 3723457 2316863 ~ 2318962 (+)
G202382 NA other downstream 772979 6815717 ~ 6816118 (+)

Expression


Co-expression Network