G202187


Basic Information

Item Value
gene id G202187
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 6133872 ~ 6134088 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU229417
AATTCAGAAACGTCTAAAAGTTGTAACTTCTTCCTGAGTCTCTCCATCAGTGTCGACTCCGGTTTGAACAATGTAAGGATGAACACCGTTACTGACAATCCTCATTTTGGCTGCGTGAGATTCTCCAGCTTTGTTGTTGTTGAGCTGTTAAAGCTCCGCCCTCTTCTGGAAAGGGGGCCGGGAGCAGCAGCTCATTTGCATTTAAAGGGACACACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229417 True 217 lncRNA 0.47 1 6133872 6134088

Neighbor

gene id symbol gene type direction distance location
CI01000047_06086322_06106616 NA coding upstream 27150 6086322 ~ 6106722 (+)
CI01000047_06062818_06067865 IRBP coding upstream 65631 6061185 ~ 6068241 (+)
CI01000047_06058032_06060776 RBP3, IRBP coding upstream 72878 6058032 ~ 6060994 (+)
CI01000047_06051877_06053164 NA coding upstream 79877 6051265 ~ 6053995 (+)
CI01000047_06045320_06049402 NA coding upstream 84185 6044702 ~ 6049687 (+)
CI01000047_06154118_06181771 MMS19 coding downstream 20030 6154118 ~ 6181892 (+)
CI01000047_06200292_06209564 PRKAR1A.S, PRKAR1AB, PRKAR1A, PRKAR1AA coding downstream 66204 6200292 ~ 6209579 (+)
CI01000047_06276613_06289736 LRRC45 coding downstream 141993 6276081 ~ 6289802 (+)
CI01000047_06293132_06300073 RAC3B, RAC3, RAC3A, RAC1, RAC1B, RAC3.S, RAC1.L coding downstream 159044 6293132 ~ 6301265 (+)
CI01000047_06331623_06334915 RCVRN, RCVRNB coding downstream 197266 6331354 ~ 6334956 (+)
G202191 NA non-coding upstream 78622 6054989 ~ 6055250 (+)
G202189 NA non-coding upstream 91134 6042419 ~ 6042738 (+)
G202186 NA non-coding upstream 94718 6038955 ~ 6039154 (+)
G202175 NA non-coding upstream 144061 5989459 ~ 5989811 (+)
G202138 NA non-coding downstream 640 6134728 ~ 6137136 (+)
G202205 NA non-coding downstream 14741 6148829 ~ 6149322 (+)
G202270 NA non-coding downstream 191447 6325535 ~ 6354043 (+)
G202283 NA non-coding downstream 231835 6365923 ~ 6366180 (+)
G202284 NA non-coding downstream 237458 6371546 ~ 6371812 (+)
G201599 NA other upstream 1651415 4415813 ~ 4482457 (+)
G201387 NA other upstream 2432012 3696516 ~ 3701860 (+)
G201186 NA other upstream 3045685 3018705 ~ 3088187 (+)
G200076 NA other upstream 3555875 2520596 ~ 2577997 (+)
G200003 NA other upstream 3814910 2316863 ~ 2318962 (+)
G202382 NA other downstream 681629 6815717 ~ 6816118 (+)

Expression


Co-expression Network