G203942


Basic Information

Item Value
gene id G203942
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 6540025 ~ 6546064 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU231468
AACCGCAATACAAACTCGGAACCGCAATACAAACTCGGAACCGCAACATACCAACTCGGTTTTTGCAAGATACCAACTTGGAATTGTGAGATACCAACTCGGAACCGCGAGATACCAACTCGGAACTGCGATACAAACTCGGAATCGCAACATACCAACTCGGTTTTTACAAGATACCAACTCGGAATTGCGAGATACCAACTCAAAATCGCGATAACTCAGAATCGCGAGATACAAAGAATTGGTATATAATCTCAAATGCGACAAAAACTCAGAATCATTGCAATTAAAAACTCTGAATCGCAAAATACAAACTCAGAATTGCGATACAAACTCGGAATTGCGATAAACTCAGAATCGCGAGATACAAACTCAGAATTACGAGATAATTCAGAATTGTGATTTAAACTCAGAATTGTGATAAACTTGCAATCACGAGATATCAAAAAGTTTGAATTGTGAGAAAAAGTTGCAATTACCTTTCTAATTTTTTATATTCCATGGCAGAAACAAGCTTCCGTACACTATGCAAAATGCTTGATTTGTGATTAAGCAGTCAATATACTGTTCGAACTCGAGATGAAAAGTATTTGAACACGTGGTTGTCAAACATTGGAGATAGTTAATATGATTCTCTACATCTGTGAGAACTGACTTCACAGGTGCACTAAAATCACCTTGACACCAATTGATTAAATGTCATTGCAAAAATGGCTCAGAAAAACACTAGCACTTGTTTGCAAATACTTTTGAGATTTCAACTTCTAACGCAATGAAATTCAAACATTTGTGGCTCAAATGTCCAAGTATATTTTGGGGCACTATATATGGTTTTGTCTGTCGATACGACGATTAATTTCCCTGGGGCCACATCTGAAAAACAACTGGAATGTTCAAATCTAAAAAAAAACAAAACAAAAAAAATACAGCATTCCTTTATCTGTACTATTTCCCATTAATGTAAATAGGATTACAGCTACTACATAGTTTAATTTCAGTACAAGAGATTTCAATGCTTTTCCGACCATGCAAACCCAACGCACTTCCGCTGTCTATTCAACGGCCCTGATCTCTGTACTCAAGTCCAGCTCTGATCAGACGAGCGAATGAAGCAGTTGTTTTTGCAGGATTAAGGTCCCGGGACACGACCCATCTCCTGAACCAACTCTTCCTGTCTCCATATCACAACCGCACCTGCACTTGTTTATTCACCAGCCTCTCTGGGTGGAAAATCTCATTTCCTCTTTCGACAAACACGTGTCCAGTATCACATACTGATGACAAATTTAGCACGACTGAGTTGTGCAATTATAAATTTAATGTCTTTAACGAATCAATCTTTTTAATACAAATTTAGATACAGTCTAAAATTTTAAATATAAACTGCATGTACTTTGACAGCTGCGCCAATGCCAATTCCATTTATGAGGTTATGAAACAAGCCTCATAAACTTTCATGTTTACAATTTTTCTATGAGTGTAAAATGATCTAGTCAGGAACAGACTTGAATTCTTGCCTTTAAGCCACATCACACTGACAAAATAATAGAAAACTACAGCAATTATTGCTAGTTTGTATGTTTTTAATCAGCAACCGAGTGACATAAAAAACTAGTTGTTGGAAATTTTCAATAGCCAGATGGTGCAACAATGCAATACTGTAGTTTAGGTCATTTATCAAATAAAATACAATAAATCTGATTTATTATAATGCATAATGCAACTTAATTCTATCTATCCTCAGAGTCAATTCTTTCACAAAAACTTTCAGTTATTGTCATGCATTATTTATTATTAATTAAGTTAAAGCAGCTGGCATCAAAGATGAGCAGCAATTTATGCAAAGAACTAGACTTGCAAAAAAGCACTGGCTGTTAATCAAGCAAAGAGCTTAAGTGTGAAAACAAGTTCAGAACCAAGTCTACCAGTTTTCAGAATTCGCTGACGTAAAGAGTATGCAGTTATGCATTCTTCGATACATCTGACGAACTGATTCTTAATTGCTCTCCATTGGGTTCAACTGGGTTTCTTCAATGAGAGAATTGTGCGCACATAATCGTATTTTCCCGGGCGTATTATCCACACTCCTAAGGTTAAAGCGTACATGCACACCTACGGTTAACAGCCATGCATCACTGGTGATGGATATTAGGCTAGACCAAAGCACCACAAAGCGGGGTTAGTATGAGAAAAGGAAGGGAAAGGGTCAGGTTTAAGGTTGCCACATGAAGTCATTACAGACGGAGAACAGCAAGGACATGGAACTCCTTGACCTTTAGGTTTTCCAAGTCTTTCTCGTATTTCAGACGCAGCAATGTTGCATCCCCATCACGCTCTTGCCGATTCATTTCCTCAGTCAATTCGGACACCCGGGACACAAGCTTTTGGATCCGTACTTTGAGGGAAGTCGAGTTTGGCTCGCCATCCCCTCCAGGCTCTTCTTCAACAGGTCCGACGACGTCCGTAAGCTCTTCCATCTCTCGATTGAAGCGGGCTTGTAAGTTATTACACTCCATCTCATGCTTCTTCTTGAGGTTCTCCATGCACACTGTCAGGGAGTCGATCTCTTTCACGTTCTCCTCGGATCTCAGCTTCAGATTCTCAGCAGCCTTGGCCACTTCCTGTCTCAGCTTCTCTGCTTCTTGTTCGTACACCTCCTTTAATTCTCGCAGCTCCTTTTTATGCTTAGCCATTGAGTCCTGAAGCTGTATGGCCTTGTCCAGAGAGTCGATTGGTTCTCCTTCGATCTGAATGTGGGTGACTGCCGTTAAGTCTCCACTGTGGACATCGCTTGACGCAACCTGCTTCTCCTCTAGTTCAGACTGAAGTTGTGCTCTCAAAGAAGCACAATTTGCACACGCAGACAGGTCTAACCGTTTCATCTCTGGGAAGATCTGTAGAACCACAAAGTACATGGATGTTACGTCCATTATGGCCTCACGAATGTACTCGGACCAGCATCTTTGAGTATCACAGCTCAAAAGAGCCAAAGCCAATGACTGTAGCTGCTCATTTGTTCGTTCCCTAAGAACCGAAGCGGTCTGATTCAATAACGCCACTTTCTTCTCAACGACTTCAGCGAGACTCTTCATAACGCAGGGATTGGTGGCATGATCAAACCAGCGATTCAAAATATTTGATTTCATTGTCTCTTCACTCCATTTTCCAGTGCTTTCATCCGTGCAAGTTGCAGGTGTTGCACGTTCTTGGAGGTTGGAGATATTATTCATAAGAAGCAGCATTTTATTATCCACTAGCATACGCTCAATGACGTTTCTTGCATCTTCAAGGGTTCGCTCTTTCTGACCGTCCTCTAAACCACCTAAAACTTCACGTAGAATCCTTCTCTCAAACATCAATCCTGTCTGATTCTCATCCAAAATGTTGGTGCTGGACAAATCCCATTCTGTAGTTGCCTTACTGCCAATTACCAACATGTCAAGTACATGATTAAGAGACTTCGACTTTCTCTTGAACTCTTCCACGACCTTCTCAATTACATCTTCATTTGTGACTGATTCTTCTCTCTGCATCAACTCTTGGCATCCACCACTTTCTGTTTCTGGTTCACTACCAAACGTTGCTTGAGTTCCTGCCTTCGGTTTCAACGTTCGCGAATCTACAAGCATCTGACTAAACATCCTTGCGGTCTCTTCGTGTTTCGTAAGGAGCTCTGTATTCTGGTGCTGAAGTTCTCGACAGACCTGCTCAGCATTTTGAAGCTTCTTCTCCTTCTCTGAAAGCTCGGACTGAAGGACCTCCAATTGGCGCTTGAGTTCGTCTTTCTCCAAATCGAACTCTTTATCGCCTTCGCTTTCTGCCACCTGAAATCCCAGACCCCTAAGAGTGGCTTCTTTTAATTGCAATCTTTTCTCTGTATCTTTCAAATTATTACCAAGCGTCTCCAATTTAACAAGAGCCTCTTGCAGCTTCTGCGATTTTTCACTGAGTTCTCGCTCGTACACATTTTTATAAGCGGTCCCGTTGTCTTCCTGCTCCCGGTTCACGTTGGCTTGCGTATATTTCTGACTGCTATGCAGTCTACAAAGCTCTGCTTTCAGCCTGTCTATTTCTCGATCCGCTTCTCTCAACTGGTTAACAATTTCCTGATAGCGCTGGTTCAAAGCTACGTTTTCGTTCGCAAGCAACTCCACCTGCTGCGACAGATCTCTGCTGGTCATTTCAGGATGGTCTTCTCTATAGCAACCTGATGCATACGGATTCTCCATTTTCTGCATCTGGACTCTTTCCAACATGTCCTCCATGTTGACCAAACGAGCTTCATAGTCTCGGATACAGTCTCCAGCCTTTTCCAAGCTTTTCCTCATTGTCTCATTCTCAATTTCCTGTTGGTTCTTGAGGCTTTCCAACAGTTTCTGGCATTGCATCATTTCGCCTACTGACCTACTGTGCTCACTTCCTTCCTGTCCTTGAAGAGATTCTACCCAAATGTATTCGCTATGCGAGTGCATGAGCTTTATCAGCTCCCTCAACGTCAGAGGCTCACTTGCGTCTATCAAGCCCTCGAGCTCTCTAATCTTTCCCTCACTATCCTGAAGTGTGAAACTGACTGTTTTTTGAATGGAGTTTGAGGGACAGACCTCTGAGGTGGCAGTTTTTTTGGTGTCAGAAAGGCAAGGTTCCTTTGTGGGCCAGTGTGAGAGAGAAAGGCCAAGCTGTGCCTGCATGTTGCGCTTTTTCAGTTCTTGCAGCTGCAGGAGCTCTTTGGTTTCCTGGTACTTCTTTGTTAAGCTCTGAGCTTGAGAACTAACCAGTTCAGTCCTCTTCATCTGTGGCTCTGTCTCAAGACTCAAAGGGGACTCCAGCTTGGAAAAGGGGACCAGACAGTTGGTTAACAGTCAGCATTGGTGAATTTCTAGAATATTAATCAACAATTATCCATAATTTTTGAGGCAAATGTACTATACATTACAACATCTCTATTAAGGTTAAAATCATTCAGCTTCTTTCATGGAATGATGTACATTAGAACGCTAGAAAAAAAATTAATGGCAAAAGGTTAGTAAATCGAAACAATGCATGCATATTAAGAGGTTAAAGAGTTGTTTCATGGGGTAAGTGACGCAAAATTAGTGCTAGGTAAGAATGCCAGAACAGTTACATGCCATCCAGTTAAAAGCCTGCAGTCCTTTTGAGGAACAATTTAACCTCACTATTGAGCAACCACTACTGTCAAATTATAGCAAACCTTTTTGATTCAAAGGTGAATAAATGAATCCATTAAAGACAACCTAGCTGGTGGAGATGAAAATGTGTCCTGGACAGACACTGAACATAGAGCATCACCTTTTATGTGTGAAACGATGCCATGCTTAAGATAAAATCACCCCAATATTTGCTTTTAATACATAAAAGCTTTAACTTTGCTATACTGAAAAGGTACATTTCTTACTCTAAGCTATTTAATCCCAAACAAGTCAATAAAAGCAATTTTGAGTCTCAGAAAACAATGCAACAATATTTTGAACAAAGCTAAAGACATACATACACACACACACACACATATAACACACACACAAACGCACACACATACTCTACAGCATATACTGAAAAAGTCAAGAATAGGGTTAAAAATGAGATGAACGAATGGTTAAATATGAATATAACATATCATGCACATTTGCCCTTAATAGGCATCTTTTCATATGCCAATGTTTATGTAGCACCTGTCTGCATTTTTAAATCATTTTCAACACCCTTAAGATACATTGATACTCAATGCTTTTGAGAAAATACAAATAGAGGACGAAACAGATCTGGCACTGAAAACTCTTAAACTACTGCATAAATACCAGTGCTGTCAAAATTAGCGCATTTGATTCATTTTTTCAGTTTAATCGCATTAGAAATATTGAACGCAATTAACGCAGAATCCGTCATAATTTGGCTAGCGTTACATTATATGATCACGCTCTTATTCACGCAAATGCTTTTAAACCATTCAAGCGCCACAAGACAAACGAGAACACGCTGTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231468 True 5998 lncRNA 0.40 2 6540025 6546064

Neighbor

gene id symbol gene type direction distance location
CI01000047_06487774_06496807 DHRS7CB, DHRS7C coding downstream 43218 6487715 ~ 6496807 (-)
CI01000047_06436919_06455480 HS3ST3A1 coding downstream 84208 6436347 ~ 6455817 (-)
CI01000047_06337531_06343900 GLP2R coding downstream 196011 6337093 ~ 6344014 (-)
CI01000047_06327240_06328630 PTS coding downstream 211395 6326771 ~ 6328630 (-)
CI01000047_06312165_06320684 NA coding downstream 218525 6311168 ~ 6321500 (-)
CI01000047_06574147_06577660 BSK146 coding upstream 27984 6574048 ~ 6577979 (-)
CI01000047_06587350_06593162 NA coding upstream 41026 6587090 ~ 6593162 (-)
CI01000047_06644025_06659494 SULT2ST1, SULT2ST2 coding upstream 97686 6643750 ~ 6659694 (-)
CI01000047_06660338_06666635 SULT2ST1, SULT2ST2 coding upstream 114236 6660300 ~ 6666635 (-)
CI01000047_06667661_06692521 NA coding upstream 121156 6667220 ~ 6692521 (-)
G204031 NA non-coding downstream 73806 6464440 ~ 6466219 (-)
G204012 NA non-coding downstream 125783 6374619 ~ 6414242 (-)
G204010 NA non-coding downstream 173373 6366375 ~ 6366652 (-)
G204005 NA non-coding downstream 194552 6345234 ~ 6345473 (-)
G203855 NA non-coding downstream 402926 6134717 ~ 6137099 (-)
G203963 NA non-coding upstream 4126 6550190 ~ 6552171 (-)
G203946 NA non-coding upstream 22933 6568997 ~ 6573581 (-)
G203924 NA non-coding upstream 160605 6706669 ~ 6751591 (-)
G204069 NA non-coding upstream 162044 6708108 ~ 6708823 (-)
G203919 NA non-coding upstream 202104 6748168 ~ 6773497 (-)
G203881 NA other downstream 496236 6043253 ~ 6043789 (-)
G203840 NA other downstream 612681 5918508 ~ 5927344 (-)
G203286 NA other downstream 1663291 4874379 ~ 4876734 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other downstream 1963060 4574335 ~ 4576342 (-)
CI01000047_04285605_04286644 COA3A other downstream 2253344 4285227 ~ 4286694 (-)

Expression


Co-expression Network