G203935


Basic Information

Item Value
gene id G203935
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 7120453 ~ 7128069 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU231461
TGAGTATTGGTTTATTCTATAGCATTAACCCATGGCTGTGTTCAGATCTAACAGAGCAGAATGACAATAATGTAACAATCACAACCGACCCGCAGGCGAACACGCCCATCATATTCATAGATGTCCTCATTAACCATGTGACGTGTGTAAGACGAGGGCAAAATATCCAAACCTGAACATATACGGCTTTATCCCTGCACATTTCCATGGTACAATTTTTACAGATTCTCACCATACACGTAAAATATTTTCACAGTGATCATTTTTTCTGTACATATTTCCCACTCTTGATACAATATAATAATACACATCGCCCTTACAATTATTTTACTCCCCGTACGAAACATTCTTGAGTTGCAATGTTCACACGATTATTTCTCAGATTGCGTTTAAGAGGATTTTCTTCTGCGGAGCTGCAAAGTTGGATTCTTAATGAGCTCGCATGACTCAGACACTTTTTCAAAATACGAAACTCTCTGAACACTATCCGGTGCCGTATTATTATACAATCAGTCCATAAAATGTTCGATAACCGCTGTACATCTTTTAAAATAAGTGACCTATGGATGAATTATGCGAGGCGGGTCGTAAACCATCATGCCAGATCCATGAAATCATGCTTTAAACGTGAGGACGAGCTTCTGAGAAACGTGTGAATCCTCCGCGTAAGTATAAATAATACACATTTACAGTGGATGAGAAGCTAACCGAGCGTTCAGTACACTAGACGTGAGTGGAAACCGTTTGGATCATCGTGACGTAATATTGCATATTGAGCAAGTAAAGCTACTTTAACACATTTCTTTGATGCAGAACAAGACCTTTGCATACCGATTCATTAAATAGAGTGACATGATGTACAATGTGTCAAACACACATGAAGAAAAACACCTGAACGGATGCGTTTCCTTCCTTTTTTGTGACGTCATTTTGGTAACACATCTACATCCCATCAACTATTACACTTGATCTGATGGTCTTTGTTTTCTTCAATGAGCAAATTCAAGTTTTGCTTGTTAATATTCCGAAATGATTTTACACACACACACACACACACACACGACGCAAAGAAATTAGAAAGGCTGTTTTGCTGAATCTGAAGCTTGTTTACACACCGTGATGTAAATGGCTTTTAAATGAGAGCCAGTTCTTATTGCACAAAATGTTTTGGGACTTTCTCTTTAAACACAATCATGTGTTCACACATAAATGATAGTACAATTATGGTGAAATACTCAGACCCTTAACCGAGACTCTCATTTCACAAATGAGCACAAATCCTACATTCAACGTTTGTTCTCCGACTCCGTGACGCCTCCACGCTGCTAAAAAAAATCATGTTCCTCCTCAGTATCTCTGTCCATCCATTGAAAATCTATTCACCCAAAACTGACACTTCAAAACATTCATAAAGAGATGGAAAAATAAATATGGTTGAGCTTCTGTTTACCATATTTGA

Function

NR:

description
PREDICTED: NT-3 growth factor receptor-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231461 True 1459 lncRNA 0.38 2 7120453 7128069

Neighbor

gene id symbol gene type direction distance location
CI01000047_07072890_07079236 GAS7B, GAS7 coding downstream 41217 7072545 ~ 7079236 (-)
CI01000047_07010651_07017023 NA coding downstream 103430 7010529 ~ 7017023 (-)
CI01000047_06993737_07007548 POLR3E coding downstream 112905 6993722 ~ 7007548 (-)
CI01000047_06978552_06982232 METTL9 coding downstream 137911 6978448 ~ 6982542 (-)
CI01000047_06968741_06972782 ERD2, KDELR2.L, ERD22, KDELR2, KDELR1, KDELR2A, KDELR2B coding downstream 147603 6968324 ~ 6972850 (-)
CI01000047_07137958_07149332 NA coding upstream 9315 7137384 ~ 7149332 (-)
CI01000047_07350018_07350608 NA coding upstream 221062 7349131 ~ 7350844 (-)
CI01000047_07351900_07353699 NA coding upstream 223798 7351867 ~ 7353753 (-)
CI01000047_07389650_07393323 NA coding upstream 261074 7389143 ~ 7393753 (-)
CI01000047_07436294_07437420 NA coding upstream 307663 7435732 ~ 7437719 (-)
G204149 NA non-coding downstream 57022 7063206 ~ 7063431 (-)
G204139 NA non-coding downstream 102123 7018123 ~ 7018330 (-)
G203947 NA non-coding downstream 222301 6896001 ~ 6898152 (-)
G204129 NA non-coding downstream 227273 6892834 ~ 6893180 (-)
G204098 NA non-coding downstream 267650 6852603 ~ 6852803 (-)
G204167 NA non-coding upstream 156470 7284539 ~ 7285427 (-)
G204175 NA non-coding upstream 168471 7296540 ~ 7296838 (-)
G204177 NA non-coding upstream 170257 7298326 ~ 7298553 (-)
G204181 NA non-coding upstream 174977 7303046 ~ 7303290 (-)
G204182 NA non-coding upstream 177910 7305979 ~ 7306594 (-)
G203881 NA other downstream 1076664 6043253 ~ 6043789 (-)
G203840 NA other downstream 1193109 5918508 ~ 5927344 (-)
G203286 NA other downstream 2243719 4874379 ~ 4876734 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other downstream 2543488 4574335 ~ 4576342 (-)
CI01000047_04285605_04286644 COA3A other downstream 2833772 4285227 ~ 4286694 (-)

Expression


Co-expression Network