Item | Value |
---|---|
gene id | G204192 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000047 |
NCBI id | null |
chromosome length | 7523058 |
location | 7327497 ~ 7327846 (-) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
id | name | namespace |
---|---|---|
GO:0016071 | mRNA metabolic process | biological_process |
GO:0000375 | RNA splicing, via transesterification reactions | biological_process |
GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | biological_process |
GO:0006397 | mRNA processing | biological_process |
GO:0000398 | mRNA splicing, via spliceosome | biological_process |
GO:0016607 | nuclear speck | cellular_component |
GO:0005681 | spliceosomal complex | cellular_component |
GO:0005685 | U1 snRNP | cellular_component |
id | description |
---|---|
ko03040 | Spliceosome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU231731 | True | 350 | lncRNA | 0.43 | 1 | 7327497 | 7327846 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000047_07137958_07149332 | NA | coding | downstream | 178165 | 7137384 ~ 7149332 (-) |
CI01000047_07072890_07079236 | GAS7B, GAS7 | coding | downstream | 248261 | 7072545 ~ 7079236 (-) |
CI01000047_07010651_07017023 | NA | coding | downstream | 310474 | 7010529 ~ 7017023 (-) |
CI01000047_06993737_07007548 | POLR3E | coding | downstream | 319949 | 6993722 ~ 7007548 (-) |
CI01000047_06978552_06982232 | METTL9 | coding | downstream | 344955 | 6978448 ~ 6982542 (-) |
CI01000047_07350018_07350608 | NA | coding | upstream | 21285 | 7349131 ~ 7350844 (-) |
CI01000047_07351900_07353699 | NA | coding | upstream | 24021 | 7351867 ~ 7353753 (-) |
CI01000047_07389650_07393323 | NA | coding | upstream | 61297 | 7389143 ~ 7393753 (-) |
CI01000047_07436294_07437420 | NA | coding | upstream | 107886 | 7435732 ~ 7437719 (-) |
CI01000047_07445474_07451503 | FOXK2 | coding | upstream | 117013 | 7444859 ~ 7451503 (-) |
G204186 | NA | non-coding | downstream | 15835 | 7311449 ~ 7311662 (-) |
G204182 | NA | non-coding | downstream | 20903 | 7305979 ~ 7306594 (-) |
G204181 | NA | non-coding | downstream | 24207 | 7303046 ~ 7303290 (-) |
G204177 | NA | non-coding | downstream | 28944 | 7298326 ~ 7298553 (-) |
G204175 | NA | non-coding | downstream | 30659 | 7296540 ~ 7296838 (-) |
G203943 | NA | non-coding | upstream | 27320 | 7355166 ~ 7368728 (-) |
G203881 | NA | other | downstream | 1283708 | 6043253 ~ 6043789 (-) |
G203840 | NA | other | downstream | 1400153 | 5918508 ~ 5927344 (-) |
G203286 | NA | other | downstream | 2450763 | 4874379 ~ 4876734 (-) |
CI01000047_04575184_04576337 | GNGT2B, GNGT2 | other | downstream | 2750532 | 4574335 ~ 4576342 (-) |
CI01000047_04285605_04286644 | COA3A | other | downstream | 3040816 | 4285227 ~ 4286694 (-) |