G204410


Basic Information

Item Value
gene id G204410
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000048
NCBI id null
chromosome length 1528931
location 284459 ~ 284687 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU232015
AGCAAACACCAGAAGAGAAGCTACTCTATACAACAGGTGGCTAAGAGGCGGCCATTTTGTGGCCTGCACAAATATCATTCTAGCCAACCTATCAAACTTCAGTTTGCCCAAAACCCCTTTTACTTTTTCCGACTACATACTCAGGAAAAACTATACAGGAACACAAGGTCAACATATTTAGAAACATAAATACAGACCCAGCTCACCTTCCTGCGGCTCAAAGACCGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU232015 True 229 lncRNA 0.43 1 284459 284687

Neighbor

gene id symbol gene type direction distance location
CI01000048_00261577_00264226 NA coding upstream 18917 261400 ~ 265542 (+)
CI01000048_00149401_00154452 NA coding upstream 130007 149401 ~ 154452 (+)
CI01000048_00036432_00113057 PSIP1 coding upstream 171402 36432 ~ 113057 (+)
CI01000048_00005001_00005627 NA coding upstream 278442 5001 ~ 6017 (+)
CI01000048_00403297_00404487 NA coding downstream 118545 403232 ~ 404614 (+)
CI01000048_00425103_00519682 NA coding downstream 140416 425103 ~ 519890 (+)
CI01000048_00567988_00568484 NA coding downstream 283301 567988 ~ 569052 (+)
CI01000048_00659494_00667971 NA coding downstream 374335 659022 ~ 670072 (+)
CI01000048_00693752_00694265 NA coding downstream 408385 693072 ~ 694474 (+)
G204395 NA non-coding upstream 1004 282650 ~ 283455 (+)
G204393 NA non-coding upstream 3131 280872 ~ 281328 (+)
G204408 NA non-coding upstream 4132 279761 ~ 280327 (+)
G204407 NA non-coding upstream 4716 279347 ~ 279743 (+)
G204406 NA non-coding upstream 5390 278833 ~ 279069 (+)
G204411 NA non-coding downstream 4271 288958 ~ 289242 (+)
G204412 NA non-coding downstream 4817 289504 ~ 290081 (+)
G204414 NA non-coding downstream 7296 291983 ~ 292837 (+)
G204415 NA non-coding downstream 8242 292929 ~ 294016 (+)
G204417 NA non-coding downstream 9374 294061 ~ 349845 (+)
G204233 NA other upstream 220862 63188 ~ 63597 (+)
G204409 NA other downstream 583 285270 ~ 285747 (+)
G204472 NA other downstream 76338 361025 ~ 361661 (+)
G204824 NA other downstream 708768 993455 ~ 993969 (+)
CI01000048_01214358_01215546 NA other downstream 929685 1214358 ~ 1215807 (+)

Expression


Co-expression Network