G204570


Basic Information

Item Value
gene id G204570
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000048
NCBI id null
chromosome length 1528931
location 684342 ~ 687727 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU232193
AAAATGTATCATATTCCATTTAATAGAAATCATGTCTAAACTGTACTCTCTATTCTCTGCCGAGAGCAGGAATTCAAGAGACCCTTAGATAACACTAGAGTATGATCATGGGGGAAGGAAATCACCTTTAAAACAAAGATGCTACCTGATTGGTCAGAACTCCTTAAAGAGGCGGGATAAACACCTAAGGCTAAATAGTCACATCACTAAGACAATAGATATGAGACTAAAAAAAAAAAGCTCATTCAAGCCATCCAATTTCTTACTCACTTTCCTTTTCTTTTACTTTAACTTACTTTTCCATTGAGAGTCTTGTGTTCTAAGTTAAGTTTTGCTGCAAAGTTTAACCAATGACTTTTGCCGCCTCAACTTTAAACTCCAGCCATAACAAGAGACTTCATTCAGTTGCCAGCATGCCCAAACGTGATTGGTTTTTATCTGACATCAATCCGGACCTGAAAAGATCCTGCAACAAATCATCGATTCGGAAATCCATTTGCTCCAAGCCAAGGGATCCCCATTCAAAGACAAATGACAAGCAAGTACCTCCAGATTCTAAAGCTGAACTGGTGCATTAAATTACTGTGATTCATGGTTCGTTCAGGTCAGGTCTTACGAAATGCATATTTTGCTAGAAATGCTCATCATTTCACTCTCCCTTAAAACTCTTTCTAATTTCCTTTCTGTTTGCTCCGTGTATGAATGTGTGTTTGTGTGTGCGTGTTTGAGTTAGAGATTAGTTTGTGTTAGAATAATCAATAAAGTCTCCTGTAGATTTTTAAAAGAAGTGTCTTGTGTTATGTGCTTTAAATTTACTGTCTTAAACTGCTGATCTAAAGTTACCGTGCTACTAAATAGTGTTTTCACGATAGTTGGATATTCAAGAGCTTATTACAGCCCAAGCAAATGAACGCTGGATGATTCAGTTGCTCGGTCTAAGTGACTCTTTATAATTGACTCTTGACTCTAAACTAAGTGACTCTTTATAATTCCCTGTAAGTTAATTAATTATTTCATTTGAGCTGATTTGTCCTACATTTATATGAAACTAATTCATTTGAAATAATGTCATATTGTAAAACCTTGCACGTGCAAGGCGATCATTTGTGTTTATAAATCATATACATTTGTATTTTTTAAGAAAATGACAGATCGTTTCGCTAGATAAGACCCTTATTCCTTGGCTGGTATTGTTTAAAGCCCTTTGAAGCTGCACTGAAACTGTAATTTTGACCTTCAACCGTTTGGAGAGACCATTGAAGTCCACTATAAGGAGAATAATCCTGGAATGTTTTCATCAAAAACCTTAATTTCTTTTCGACCGAAGAAAGAAACACATGAACATCTTGGATGACATGGGGGACATCAATGTGTCGTCATGAGCCGCAGGGTTTAATTTGGATTTGTCTGTGGACTAATCCTTTAAACTACGCCAGAGCGCGTACACACCTCACGCACCGGATGCCGTGCAAGCGCTCAAGGCAGTTGGACATAGTGGTGTATTAGAGATTGTGTTCCCATTGACATGCATTATACGACTGACAGACTGCAATGGTTGGAGTTTAAAAATCATCATTTGTGTTCTACTGAAGAAACAAAGTCACCTACATCTTGGATGCCCTGGGGGAAGTTGACATCCACATCCAAGACAGCACACCCCACTGGGTGAAGACAGAAGAGTCACACCTCACTATTAAGTGTTTACAGTTAATAGTGAGATTAACTATTAACCCCATTCCCTTAATCATAAGAAAAATCACCTTTAAGATCTAGAATCTGGAACAAACACTGTATGCTAATGAGTTCAAACTCCACCCAGATCTCTCACACACAATTACCTCCTGTATGTAAATGAATTGCATCTTCCCACAGAAATCAAAGAAAAATTCTCACCACTAACTTACATCCCCCAAAGAGAAGTCCCCAAATGATTATAATAATAAACAACACCATTTGGTAAATTCATAAGATATCTGGATATTTAAAAGAGGGTGGCAAAGGGTTCAGGGAATCTGTAAACAGGTCTTCCGCACGATCACTGTGTGTAGTTCTCATTGCCAGGTAAATACTTTCAAAGTCTTTATTTGTATTATTGAATGTTTTATTTATTATTATTCAAACTTTATTTGAATCTGTATTATTTCATTTACCTGGTTAATAAATTGTTATGTTTGAATTTATTCTGTCTTACTCTGAAATTATTTTCTCAAGTAGATTAAGTGAAGGTTTATGTTACCGCAAATCTGGGTCAGGTTAGTAACAGACTAAAGTCCAGTTTTGGGTGGAGCATTGGGCACACCACCTGAGATTTTAGAGTTCCGACTAACATCTGGTACTAGTTCAAGTGTACTTAGACTGTAAAGGCTAAAATGGGAATTTCCGTTTAGGACAACAAAATGTTGATCGACCAACCTAAATAGGGTGGGCCTTACCTCTGTTTAATGTAATGTTACTCTAGCTAAGTATACATGGGAAACCATAGCATGACTAAATCAAAACTACTATCAGAGGAAGTAATATTGGTCGGCTTATATCTATAGTAGTGGTCATGACCTCTGTCTAGAACTAATATTGCTTTAATTCAAGTGTATACAGATCTATGGGGACTAAACAAAATACTTTCAGAGAAAGCAAGCATGAGAGAGGCGCTCTAATAGTATAGTCAATTACCTCGGTCTAGTGACCAAAAACTGGCCAGTTTGTGATCGTGAGGCCTGCATTAAACGGCCATTGCGAGGTTCTCAATGCGACAGATTCCTAATGAACGAGTAAAATATAAAGTAAAGAGTTAAATAGAATAATCAAACATTTATGCAAATTATGAGTGGTCTTAAGATTAGACTGACAACATATGATGTTGATCTGGTTAAATATCTACGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU232193 True 2881 lncRNA 0.37 4 684342 687727

Neighbor

gene id symbol gene type direction distance location
CI01000048_00659494_00667971 NA coding upstream 14863 659022 ~ 670072 (+)
CI01000048_00567988_00568484 NA coding upstream 115290 567988 ~ 569052 (+)
CI01000048_00425103_00519682 NA coding upstream 164452 425103 ~ 519890 (+)
CI01000048_00403297_00404487 NA coding upstream 279728 403232 ~ 404614 (+)
CI01000048_00261577_00264226 NA coding upstream 418800 261400 ~ 265542 (+)
CI01000048_00693752_00694265 NA coding downstream 5345 693072 ~ 694474 (+)
CI01000048_00705234_00707566 NA coding downstream 17134 704861 ~ 707608 (+)
CI01000048_00713811_00714700 NA coding downstream 25752 713479 ~ 714947 (+)
CI01000048_00809677_00812096 NA coding downstream 121950 809677 ~ 813160 (+)
CI01000048_01003499_01009234 NA coding downstream 315021 1002748 ~ 1010512 (+)
G204569 NA non-coding upstream 385 683694 ~ 683957 (+)
G204568 NA non-coding upstream 1008 682359 ~ 683334 (+)
G204567 NA non-coding upstream 6890 670679 ~ 677452 (+)
G204566 NA non-coding upstream 13665 670458 ~ 670677 (+)
G204565 NA non-coding upstream 13919 670187 ~ 670423 (+)
G204571 NA non-coding downstream 291 688018 ~ 688220 (+)
G204572 NA non-coding downstream 1269 688996 ~ 689533 (+)
G204573 NA non-coding downstream 2240 689967 ~ 690439 (+)
G204576 NA non-coding downstream 7207 694934 ~ 751948 (+)
G204472 NA other upstream 322681 361025 ~ 361661 (+)
G204409 NA other upstream 398595 285270 ~ 285747 (+)
G204233 NA other upstream 620745 63188 ~ 63597 (+)
G204824 NA other downstream 305728 993455 ~ 993969 (+)
CI01000048_01214358_01215546 NA other downstream 526645 1214358 ~ 1215807 (+)
G205026 NA other downstream 695228 1382955 ~ 1383698 (+)

Expression


Co-expression Network