Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000049_01971492_01983341 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000049 |
| NCBI id | null |
| chromosome length | 9665442 |
| location | 1971291 ~ 1984030 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000049_01971492_01983341.mRNA | False | 1408 | mRNA | 0.40 | 6 | 1971291 | 1983918 |
| TU235213 | True | 231 | lncRNA | 0.31 | 1 | 1983800 | 1984030 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000049_01956684_01959474 | NT5C2B, NT5C2, NT5C2A | coding | downstream | 11817 | 1956684 ~ 1959474 (-) |
| CI01000049_01853220_01857322 | DPCD | coding | downstream | 113969 | 1852177 ~ 1857322 (-) |
| CI01000049_01782181_01783289 | LBX1B | coding | downstream | 187236 | 1781736 ~ 1784055 (-) |
| CI01000049_01773383_01778313 | CENPK | coding | downstream | 192482 | 1772768 ~ 1778809 (-) |
| CI01000049_01678202_01768140 | NA | coding | downstream | 203151 | 1678202 ~ 1768140 (-) |
| CI01000049_02107910_02122886 | PNPLA4 | coding | upstream | 123818 | 2107736 ~ 2124286 (-) |
| CI01000049_02331749_02338716 | NA | coding | upstream | 347378 | 2331296 ~ 2338723 (-) |
| CI01000049_02519296_02524006 | NA | coding | upstream | 535159 | 2519077 ~ 2524006 (-) |
| CI01000049_02876185_02882477 | NA | coding | upstream | 891510 | 2875428 ~ 2882856 (-) |
| CI01000049_03081339_03089363 | NA | coding | upstream | 1097091 | 3081009 ~ 3089363 (-) |
| G207208 | NA | non-coding | downstream | 69151 | 1901093 ~ 1902140 (-) |
| G207235 | NA | non-coding | downstream | 153543 | 1817336 ~ 1817748 (-) |
| G207228 | NA | non-coding | downstream | 178965 | 1792008 ~ 1792326 (-) |
| G207187 | NA | non-coding | downstream | 314003 | 1638659 ~ 1657288 (-) |
| G207188 | NA | non-coding | downstream | 346975 | 1610986 ~ 1624316 (-) |
| G207296 | NA | non-coding | upstream | 35097 | 2019015 ~ 2019358 (-) |
| G207313 | NA | non-coding | upstream | 86079 | 2069997 ~ 2070264 (-) |
| G207286 | NA | non-coding | upstream | 117360 | 2101278 ~ 2101705 (-) |
| G207320 | NA | non-coding | upstream | 157490 | 2141408 ~ 2141610 (-) |
| G207326 | NA | non-coding | upstream | 172589 | 2156507 ~ 2156778 (-) |
| G206938 | NA | other | downstream | 1143646 | 825859 ~ 827645 (-) |
| G206850 | NA | other | downstream | 1338096 | 632680 ~ 633195 (-) |
| G206849 | NA | other | downstream | 1339715 | 631143 ~ 631576 (-) |
| G207278 | NA | other | upstream | 3093 | 1987011 ~ 1988767 (-) |
| G209491 | NA | other | upstream | 4044171 | 6028089 ~ 6028469 (-) |
| CI01000049_08056071_08059039 | TIMM10.S, TIMM10, TIMM10.L | other | upstream | 6071715 | 8055633 ~ 8059179 (-) |
| CI01000049_08452153_08453389 | CISD2 | other | upstream | 6467224 | 8451142 ~ 8454233 (-) |
| G211175 | NA | other | upstream | 6481375 | 8465293 ~ 8476265 (-) |
| G207272 | NA | non-coding | downstream | 2187 | 1981412 ~ 1981613 (-) |
