CI01000049_02331749_02338716


Basic Information

Item Value
gene id CI01000049_02331749_02338716
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 2331296 ~ 2338723 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_02331749_02338716.mRNA
ATAGGCTATGGATGTGCACCGCTATAAACGTACTATGAGGAAAACAATCATGAAGCACATCTCACTGTACCGAGCTTTGGTTAGCCACAGCGCGTGTAGCCGGCGCGAATTAAACACTCAAAGCAAAATCGTTGCATCGTCCGGATGGATTAAGCTTTCAGAGAGCAAGAGAAAGAGGAAAAAATCCTGTGAACCAGCTGGAAATAAGCGTTATCTGCATTGTACGGCTTCTGTCCTGCCGCCCGACTTCCTGAGGTACGGTCAAAATGTATGTGCCACACAAGGGAAAAAAATCAAACTCCGTCCTGCCCCTGTTAAAATCCAACGTGATGCTGCCGTCCGAAAGAGAGGTGGCACACCGGAGACTGTTCAACAGAGACGCGGTAACATATCTGATGTAAATGACCCACATAGATTAAGTCTAATAGCAGGGATCTGTCTAGTGCCTGCTGACCCCAAATGTAGTTACACATTTAATCTGGCCGCATCCTGCAGTCACGTCAGGAGAGTATGTTCTACTTTCTTGGAAAACGGTGCTGGATCAGAGGAGCTTCAAAAGACTGACCTGCTTACAGATGTGGTGATTCTGGCTCCCCATACCTGACAAAGACACTCACAGAGACAAATGCACTCATACCAAAAGCATAAACACACTATCTTGAATGCAAAATTATTCAGGCAAATATTCTCCCAGGCAAAAACACATTTATCTGCACATGGTAGTCACACATATACGCTCATAGGTATTAAGACATATGCATACACGATTGCATGTGAACATAAAATAGGTTTTCATCCAGTGCTTCACGGCAAAATTATTCTGTAGCTGTTTAACACAGCTGAGCCTCAAAGCAGAAAATATTTACGTAATTTTATTTCTCACAGTGATCATTTTAATTCAAGTGTAAAAAAAAGTATTTATAGAAACGTTTTTAAAAGAATTAACTCTAACAAATGTTCAAAATGTGTTATGATTTCATAAAAATACCCTTCATAAAAGTAATTTACAGAATCCTTTTTGTATATATAGCTGTAGCTTTAGACAGCTGCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_02331749_02338716.mRNA True 1057 mRNA 0.40 5 2331296 2338723

Neighbor

gene id symbol gene type direction distance location
CI01000049_02107910_02122886 PNPLA4 coding downstream 207010 2107736 ~ 2124286 (-)
CI01000049_01971492_01983341 NA coding downstream 347378 1971291 ~ 1984030 (-)
CI01000049_01956684_01959474 NT5C2B, NT5C2, NT5C2A coding downstream 371822 1956684 ~ 1959474 (-)
CI01000049_01853220_01857322 DPCD coding downstream 473974 1852177 ~ 1857322 (-)
CI01000049_01782181_01783289 LBX1B coding downstream 547241 1781736 ~ 1784055 (-)
CI01000049_02519296_02524006 NA coding upstream 180354 2519077 ~ 2524006 (-)
CI01000049_02876185_02882477 NA coding upstream 536705 2875428 ~ 2882856 (-)
CI01000049_03081339_03089363 NA coding upstream 742286 3081009 ~ 3089363 (-)
CI01000049_03093994_03098141 NA coding upstream 755114 3093837 ~ 3098141 (-)
CI01000049_03204366_03212170 CREB1, CREB1B, CREB1A coding upstream 865168 3203891 ~ 3212506 (-)
G207394 NA non-coding downstream 6233 2324839 ~ 2325063 (-)
G207393 NA non-coding downstream 8548 2322307 ~ 2322748 (-)
G207391 NA non-coding downstream 14054 2316965 ~ 2317242 (-)
G207385 NA non-coding downstream 23396 2307700 ~ 2307900 (-)
G207383 NA non-coding downstream 30228 2300780 ~ 2301068 (-)
G207418 NA non-coding upstream 47480 2386203 ~ 2389249 (-)
G207474 NA non-coding upstream 124351 2463074 ~ 2463307 (-)
G207479 NA non-coding upstream 127881 2466604 ~ 2466936 (-)
G207482 NA non-coding upstream 131044 2469767 ~ 2470051 (-)
G207483 NA non-coding upstream 134385 2473108 ~ 2473378 (-)
G207278 NA other downstream 342529 1987011 ~ 1988767 (-)
G206938 NA other downstream 1503651 825859 ~ 827645 (-)
G206850 NA other downstream 1698101 632680 ~ 633195 (-)
G206849 NA other downstream 1699720 631143 ~ 631576 (-)
G209491 NA other upstream 3689366 6028089 ~ 6028469 (-)
CI01000049_08056071_08059039 TIMM10.S, TIMM10, TIMM10.L other upstream 5716910 8055633 ~ 8059179 (-)
CI01000049_08452153_08453389 CISD2 other upstream 6112419 8451142 ~ 8454233 (-)
G211175 NA other upstream 6126570 8465293 ~ 8476265 (-)

Expression


Co-expression Network