CI01000049_02519296_02524006


Basic Information

Item Value
gene id CI01000049_02519296_02524006
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 2519077 ~ 2524006 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_02519296_02524006.mRNA
AGTGAACAAGATCAGTCTGATATGCAGATTGATCCTCCCAGTGATGCAGATAATGAACAAGAGTTTTACCCAGAAATTGCTGATGAATCACAGTTCTTTAAAAATACCTGCAACACTCAGCCACTGAAAACTGATCAGAAAAGAAAAACAGTTTTCAAGAACAGCTTCAACTATGTTGAGCCAGTTCAGATCTGTCTAGGTCAGAATGAGGCAGGCAAAGAGTGTTTTGCCCAGTATGTTCCTATTAAACAGACAATTGATTCTCCATTCCATTGCCAATCAGTGCAGGAACAATATAAGCAAGTACACTCCAGTATTGGTTCTAAGGATATTCTTAAGGATGAGTGGGATGGCAAAAATATGGCTAAGAATGTGCTCTTCCAGACGGAGAGCTCATCACTGAGCTTGATCCTGTATCAGGATGCATTTGAAGTGTATTCTGGTCAAGACTTGGTTATGGGCACTCTTGTTAATGACCTTAAAGATCTTGAGCTCAATGGTGTTACCCTGTCTGATGGAAAGGTTTACAAGGGAACTTTGTGTGCCATTGCAGGCAACAACCTAGGCTCACATAACATAGGAGGCTTTGTGGAGAACTTCAGCAGGAGTTCACACTTCTGCAGATATTGTGATATCAGCAGAGAAGCATTCCATGCAGATCCTCTTATCCAGAGCACAAAACGCACAGTGCAGTCATACAGTGGTCATGTTCAGAGCAGTGAAGGACAGTCTACATCTAGTGGAGGTGTTAAATATAACTTTGCATTTAACACGCTCAAATACTTCCATGTATGTCAGCCAGGGTTGCCTCCATGTCTTGGCCACGATCTTTTTGAAGGTATTGTATCCTCTGATCTGGCACTGTACATTAACCATCTTGTTAAGGTGGATAAAATGTTTAGCTATCTTGAGTTGAATCGACGAATAAATCAGTTCAAGTATCTCGGTAGGGATGCTAATGACAAACCATGTAAGGTTAATCCAGAGGGTGGAAAACTTGGGGGACATGCTGTGCAGAATTGGTGTTTGCTGAGAATGTTGCCCGTTTTGATTGGAGACAAAGTAAAAAATCCAGGGGCTCGTCTCGTTACTGGAAAAATCAAAGTGGTTCTCGTTCATAAGGATTCAGCAGTATGTATTCCTGACATGGGTGTTTACAGCCTCACACTGATGCAGAGAAGCTACTGTTGTATTAATCAGGAGAATCTGCTTGATTACTATCCCTTGCCTGAGTACACTGTCCATGGCACACCACTGATAATTCTTCACCATTCTTTCCCTCTAGTCCAGAATGATGAAACCGAGACAGTTACATTGGATTTACAAGTCATTCCAACTTCGTCACCACTGTGTAGTGATTGGTCGGTGTCTGGGTCTTCATCACCAACATTATGCACTCCGCCTAATTCTAGCTCATCACAGCTATCGGCTATTTCGTCATGTTTAAGCCAGGCAAGAAACAGCGAGCCAAGCAACAGACCTTCCACATCTCCGATACTGAAAACATGGCCAGAAACATTCCAGGTTCCTTGGGAACAAATGCCACAGGAAATTCGTTCTGCAATTGCAGATGGCAAGAGACCTAAACCAGTGGAGCGACGCCAGATGGTACGAGTACTCGCGGATGAAATGAGAAGGTATGAAGCTAACCCCACTCACGCACAATGCCTAACTGTGGTTCGAAATATCATCAGCCAGTACCCAAAGAGTTTTGCTGATATTGCACCAGATGGGTCACTTCTGTGTGGAGGTTATACATCACTTTTGATTCAATTGAAAAACCGCATTGAGAATGTGAATCGTGATGGAAGCTTCTCATGCCACCGATCCTCTACAGACAAGACGGGTCCAACTGACACATATGGATGTACACGATTTCAGCCAGAGCTACCCCCAGAAGAAACTGATGACACTGTGGAGCAGCACCGTCAGAGACTGGAGGAGATTTACAGACAGGAGGGTGCAGGTGGAGCAGAAAGAGCAGAAGTTAAAAATCTAATGGAGCTCACATTCTCTCTACAACGTCGCCATATAAATACACTTCCACCACCTGACATTGAAGATGTGAAAAGCAAATGGCCTTTTCTTTTCACGCCAAGGTATATATACGCGCATTTTGAGTTGCTCACAGACATCAATGTGCTTCGTAGCTTGGAACTCAGTATGGAGGAATGTGGAAGAGCCATCACAGAATACTTCAGGGGAAAACCTACCAACAAAGATGTCAAGGATATCCTCTCTAATGATGAAGATAATGAGATGGCACTTCGTGTTGTTCAGCTGCTCATGGCACACTTTGGAGAGGACCTAACCGGGCTGATCCTTCTTACAGATGTGTCTGCCACTGCAGCTGATGTTGAGACAACTCTCAGTCTTCCTGCAAGTCCTCGCCTGATACTGCCTGGTGCAACAGGGCAAGTCACAATTAAGGGTTGGATGATCACCTTTGAGGGCTGTGTAATCTCTGAGGGCATCACACCAACATTTGCAATGGGACTTGCTGCTATGTTTGCAATCTACTACATATTCAACCTTCAGTATCAAGATGAAGCAGCCTGCACTCTGGAATTCATTTAGAGGTAAACCCCCTTCATTCCCTGTCATCATTATATGGATATATATTATAATTAAATTAATGTGTTTGTATTTTTTTTGCATAAAATGGTATTAGTACTGTACATTTCAAGCCTCAACACACACACACACACACACACACACACAGGGTATAGGCTTTATTATAATTCCATTTGATGTCATTCAATCCACTCTATTTGTGCAATGATATAAGACAAAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_02519296_02524006.mRNA True 2796 mRNA 0.43 7 2519077 2524006

Neighbor

gene id symbol gene type direction distance location
CI01000049_02331749_02338716 NA coding downstream 180354 2331296 ~ 2338723 (-)
CI01000049_02107910_02122886 PNPLA4 coding downstream 394791 2107736 ~ 2124286 (-)
CI01000049_01971492_01983341 NA coding downstream 535159 1971291 ~ 1984030 (-)
CI01000049_01956684_01959474 NT5C2B, NT5C2, NT5C2A coding downstream 559603 1956684 ~ 1959474 (-)
CI01000049_01853220_01857322 DPCD coding downstream 661755 1852177 ~ 1857322 (-)
CI01000049_02876185_02882477 NA coding upstream 351422 2875428 ~ 2882856 (-)
CI01000049_03081339_03089363 NA coding upstream 557003 3081009 ~ 3089363 (-)
CI01000049_03093994_03098141 NA coding upstream 569831 3093837 ~ 3098141 (-)
CI01000049_03204366_03212170 CREB1, CREB1B, CREB1A coding upstream 679885 3203891 ~ 3212506 (-)
CI01000049_03256991_03257622 CLDNG coding upstream 732849 3256855 ~ 3257622 (-)
G207504 NA non-coding downstream 8546 2510053 ~ 2510531 (-)
G207499 NA non-coding downstream 23146 2495731 ~ 2495931 (-)
G207493 NA non-coding downstream 32085 2486785 ~ 2486992 (-)
G207492 NA non-coding downstream 32626 2486187 ~ 2486451 (-)
G207491 NA non-coding downstream 33281 2485508 ~ 2485796 (-)
G207548 NA non-coding upstream 131909 2655915 ~ 2659712 (-)
G207590 NA non-coding upstream 227465 2751471 ~ 2751799 (-)
G207655 NA non-coding upstream 522599 3046605 ~ 3046831 (-)
G207577 NA non-coding upstream 590153 3114159 ~ 3114981 (-)
G207669 NA non-coding upstream 681636 3205642 ~ 3223982 (-)
G207278 NA other downstream 530310 1987011 ~ 1988767 (-)
G206938 NA other downstream 1691432 825859 ~ 827645 (-)
G206850 NA other downstream 1885882 632680 ~ 633195 (-)
G206849 NA other downstream 1887501 631143 ~ 631576 (-)
G209491 NA other upstream 3504083 6028089 ~ 6028469 (-)
CI01000049_08056071_08059039 TIMM10.S, TIMM10, TIMM10.L other upstream 5531627 8055633 ~ 8059179 (-)
CI01000049_08452153_08453389 CISD2 other upstream 5927136 8451142 ~ 8454233 (-)
G211175 NA other upstream 5941287 8465293 ~ 8476265 (-)

Expression


Co-expression Network