CI01000049_03247914_03248937


Basic Information

Item Value
gene id CI01000049_03247914_03248937
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 3247914 ~ 3249051 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_03247914_03248937.mRNA
ATTGGACTGCTCCTTTGGTTTTTACCCTCTGCCTGTTTTTTTTGGATCTGTTTATTGCTATTGTCTACAATAAACAACCGCACATGGATTCTAACTCAGCCTCAGCATCTACGTTACAGAATACTTCGCCACCCATGAATCCAGCGGAAGTTTTAAACCCACAGACGGCGTTCGCTTATCAGAGCGAGATGCTAAAGAATTATCAGAAACAGCTCGCTAAGTCCCAAACAGTCAACGAACATCTGACGCACTACATCTGGTCACTTCCTCCACCCACGCCAAAGACTGTAAGCTTTGCTCTTCCTAACAAGTTTGATGGTACTGCTGAGCAATTGATGATCGATTCTGGGGCCGCACTTAATCTGATCAACAAGGACATCATCACCAAGTATAACATCCCCACTCAACCATATACCCCACCTATCAAGATCAAAGCCATCAACGACACCCTGATTGGAAAAGGAATCACTCATCAGACCAAAACGTTGGGTTATTACATCAAGAATCCATCACATTATACATCGTTGACTCTCCCAAGCACAAAGTCATCCTGGGCTACCCCTGGCTCTCTGCCCATGACCCCGATATTTCCTGGTCTCACGGTGAACTCACTCGTTAGTCCACGTTCTGTATAAATCATTGCTTCACTATGAGACTCCAGCCATGTCTAACTACCAGCATTGAAAGTCCTGACACTCAGAAAATCGTGAGCATTCCCACCTACTACAACAACCTGTCAGAAGTCTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_03247914_03248937.mRNA True 749 mRNA 0.45 2 3247914 3249051

Neighbor

gene id symbol gene type direction distance location
CI01000049_03214802_03219475 CHMP2B.L, CHMP2BA, CHMP2BB, CHM2B, CHMP2B, CHMP2B.S coding upstream 28328 3214524 ~ 3219586 (+)
CI01000049_03133436_03158345 DHRSX coding upstream 89237 3133297 ~ 3158677 (+)
CI01000049_03121188_03131739 NA coding upstream 116003 3121188 ~ 3131911 (+)
CI01000049_03064154_03077534 NA coding upstream 169917 3064154 ~ 3077997 (+)
CI01000049_02997869_03042673 PRKX coding upstream 205151 2997591 ~ 3042763 (+)
CI01000049_03253972_03255119 HTR1FB, HTR1F coding downstream 4921 3253972 ~ 3255140 (+)
CI01000049_03259617_03273490 NA coding downstream 10123 3259174 ~ 3274591 (+)
CI01000049_03279568_03285640 ARL13B coding downstream 30517 3279568 ~ 3286185 (+)
CI01000049_03292042_03304890 NA coding downstream 42991 3292042 ~ 3305101 (+)
CI01000049_03475307_03572415 EPHA6 coding downstream 226256 3475307 ~ 3572415 (+)
G206659 NA non-coding upstream 142575 3103635 ~ 3105339 (+)
G206656 NA non-coding upstream 161777 3084546 ~ 3086137 (+)
G206654 NA non-coding upstream 166471 3080980 ~ 3081443 (+)
G206723 NA non-coding upstream 185710 3061979 ~ 3062204 (+)
G206721 NA non-coding upstream 187184 3060442 ~ 3060730 (+)
G206658 NA non-coding downstream 54749 3303800 ~ 3304088 (+)
G206787 NA non-coding downstream 64434 3313485 ~ 3313916 (+)
G206788 NA non-coding downstream 73679 3322730 ~ 3323199 (+)
G206789 NA non-coding downstream 74515 3323566 ~ 3323905 (+)
G206805 NA non-coding downstream 88528 3337579 ~ 3338144 (+)
CI01000049_01840330_01843844 FGF8B other upstream 1404086 1839815 ~ 1844077 (+)
G207888 NA other downstream 374951 3624002 ~ 3624311 (+)
G208074 NA other downstream 628345 3877396 ~ 3882211 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other downstream 1224474 4473662 ~ 4476270 (+)
G209660 NA other downstream 3629082 6878133 ~ 6882030 (+)
CI01000049_07219171_07224229 NA other downstream 3969797 7218811 ~ 7224268 (+)

Expression


Co-expression Network