Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000049_03756695_03758838 |
| gene name | KLF12 |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000049 |
| NCBI id | null |
| chromosome length | 9665442 |
| location | 3756423 ~ 3759295 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| klf12 | Enables DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within negative regulation of transcription by RNA polymerase II. Located in cytosol and nucleoplasm. |
| id | description |
|---|---|
| K09205 | KLF8_12; krueppel-like factor 8/12 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000049_03756695_03758838.mRNA | True | 1104 | mRNA | 0.43 | 3 | 3756423 | 3759295 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000049_03631096_03632219 | KCTD12.2 | coding | upstream | 124053 | 3629377 ~ 3632370 (+) |
| CI01000049_03593799_03605097 | SLC5A7 | coding | upstream | 149932 | 3593727 ~ 3606491 (+) |
| CI01000049_03584412_03585910 | ARL6 | coding | upstream | 170324 | 3582032 ~ 3586099 (+) |
| CI01000049_03475307_03572415 | EPHA6 | coding | upstream | 184008 | 3475307 ~ 3572415 (+) |
| CI01000049_03292042_03304890 | NA | coding | upstream | 451322 | 3292042 ~ 3305101 (+) |
| CI01000049_03843068_03843461 | NA | coding | downstream | 83557 | 3842852 ~ 3843545 (+) |
| CI01000049_03844455_03850424 | GPALPP1 | coding | downstream | 85160 | 3844455 ~ 3850430 (+) |
| CI01000049_03852103_03860363 | GTF2F2A | coding | downstream | 92808 | 3852103 ~ 3860774 (+) |
| CI01000049_03872066_03885573 | NA | coding | downstream | 112771 | 3872066 ~ 3886240 (+) |
| CI01000049_03893675_03894085 | NA | coding | downstream | 132884 | 3892179 ~ 3895169 (+) |
| G208019 | NA | non-coding | upstream | 44489 | 3710751 ~ 3711934 (+) |
| G207989 | NA | non-coding | upstream | 114870 | 3641252 ~ 3641553 (+) |
| G207889 | NA | non-coding | upstream | 128249 | 3627949 ~ 3628174 (+) |
| G207876 | NA | non-coding | upstream | 164586 | 3591457 ~ 3591837 (+) |
| G206829 | NA | non-coding | upstream | 385085 | 3371097 ~ 3371338 (+) |
| G208071 | NA | non-coding | downstream | 140414 | 3899709 ~ 3901473 (+) |
| G208090 | NA | non-coding | downstream | 163131 | 3922426 ~ 3922879 (+) |
| G208095 | NA | non-coding | downstream | 173069 | 3932364 ~ 3932589 (+) |
| G208096 | NA | non-coding | downstream | 173977 | 3933272 ~ 3933626 (+) |
| G208098 | NA | non-coding | downstream | 180765 | 3940060 ~ 3940304 (+) |
| G207888 | NA | other | upstream | 132112 | 3624002 ~ 3624311 (+) |
| CI01000049_01840330_01843844 | FGF8B | other | upstream | 1912595 | 1839815 ~ 1844077 (+) |
| G208074 | NA | other | downstream | 118101 | 3877396 ~ 3882211 (+) |
| CI01000049_04473766_04475768 | GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 | other | downstream | 714230 | 4473662 ~ 4476270 (+) |
| G209660 | NA | other | downstream | 3118838 | 6878133 ~ 6882030 (+) |
| CI01000049_07219171_07224229 | NA | other | downstream | 3459553 | 7218811 ~ 7224268 (+) |
| G210091 | NA | other | downstream | 4114455 | 7873750 ~ 7878856 (+) |
