CI01000049_03889930_03891510


Basic Information

Item Value
gene id CI01000049_03889930_03891510
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 3889737 ~ 3891704 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_03889930_03891510.mRNA
AGTACTTATGATCCAAGGAGGTGAAGATACAAGTCAAGAAATACAAGAAAAGAGAAAAACAGAGATGGTGAGAGACGTCATAAAACTTAACAGCTTACAGCGCATACTCCGTGCAAACAAAATTTACAGCTCTCAGTTTTGTATATTAACTAATAAAATATAAATACACATTTTCTGATAAGAGACATTCAACAATGGGCAACTGTGTCTTTCAGATTAAGTGCAACATTGTCGCTTCTCTCTTACTGCTATCGCTTAGTGTCAGCGGCACCACAAATGGGTCTGAGCAGCATTGTAATCCAGTGATGAAAGTGCCACGAAACACAGTGTTTAAAGCTCGTGTTATGACAGTGTTGAAGATAAACTGTACTGTGAATCTAACTGGATGTCACAGGAGCCCAAGAGTCTCATGGTGCAAAATCATTGGAAATGACTGTAAAGCTTTAAATCACTCAGATTACATAAAAACTGAGTTGAAGAAAACAACAGAGCATGAATGGATGGTTTTCATGATTTTCCTGAACATCTCAATGGAGGATGCGGGTTTATACAGATGTAAAGAAGGCGAGATGTCTGTAGGCCATGCTATTAATGTCACTGTGACATTATTAGATGATCAGAATACACTTCAAAATGATGATCAGCAGTGGCTTTGGCCATATGTTTACATCTGCAGTGGAATAGCAGGGCTGGTGTTCATAGTTATGACATTACTTTATGTTGTTGGACGCCATTGTGAGTAGTTTGAGTGTTTAAACTAAACTTTACAGTTGCTTTAAAATCACTTTTTGTTTCCTCGGTTGATATGATTTATTTCTTTATTTATTTTAGGGAGAAAATCAACAAGAAAAGATATGGCAGATAAAAATCAGGTATTATTTGTTTTAATTTTATTTGGTGTAAATCTTTATATTTGTTGAATAATACATTAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_03889930_03891510.mRNA True 936 mRNA 0.35 3 3889737 3891704

Neighbor

gene id symbol gene type direction distance location
CI01000049_03864331_03867898 TPT1 coding downstream 21770 3864009 ~ 3867967 (-)
CI01000049_03790418_03842410 PIBF1 coding downstream 47132 3789986 ~ 3842605 (-)
CI01000049_03782311_03782489 KLF5 coding downstream 107248 3781411 ~ 3782489 (-)
CI01000049_03749311_03749697 NA coding downstream 137692 3748089 ~ 3752045 (-)
CI01000049_03667851_03702669 NA coding downstream 187068 3667851 ~ 3702669 (-)
CI01000049_03901904_03904746 NA coding upstream 9711 3899710 ~ 3905482 (-)
CI01000049_03910844_03911566 NA coding upstream 19055 3910759 ~ 3911708 (-)
CI01000049_03926423_03936158 NA coding upstream 34658 3926362 ~ 3937709 (-)
CI01000049_03937868_03938590 NA coding upstream 46117 3937821 ~ 3939159 (-)
CI01000049_03944325_03944819 NA coding upstream 52585 3944289 ~ 3945258 (-)
G208287 NA non-coding downstream 129681 3756903 ~ 3760056 (-)
G208246 NA non-coding downstream 212933 3641999 ~ 3676804 (-)
G207990 NA non-coding downstream 248186 3641141 ~ 3641551 (-)
G207980 NA non-coding downstream 256929 3631059 ~ 3632808 (-)
G207974 NA non-coding downstream 275748 3613760 ~ 3613989 (-)
G208332 NA non-coding upstream 47892 3939596 ~ 3939797 (-)
G208413 NA non-coding upstream 272132 4163836 ~ 4164051 (-)
G208414 NA non-coding upstream 338167 4229871 ~ 4259908 (-)
G208459 NA non-coding upstream 401163 4292867 ~ 4293095 (-)
G207278 NA other downstream 1900970 1987011 ~ 1988767 (-)
G206938 NA other downstream 3062092 825859 ~ 827645 (-)
G206850 NA other downstream 3256542 632680 ~ 633195 (-)
G206849 NA other downstream 3258161 631143 ~ 631576 (-)
G209491 NA other upstream 2136385 6028089 ~ 6028469 (-)
CI01000049_08056071_08059039 TIMM10.S, TIMM10, TIMM10.L other upstream 4163929 8055633 ~ 8059179 (-)
CI01000049_08452153_08453389 CISD2 other upstream 4559438 8451142 ~ 8454233 (-)
G211175 NA other upstream 4573589 8465293 ~ 8476265 (-)

Expression


Co-expression Network