CI01000049_03910844_03911566


Basic Information

Item Value
gene id CI01000049_03910844_03911566
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 3910759 ~ 3911708 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_03910844_03911566.mRNA
ATATTCTAGGGATTAGCCCAGACTTCTCCTTATTTGTATCTTTCAAATGATATTCATACAGTGTGGACACATTACACTTCATGAAGGGTCACAACACAATCCTCATTCTAGCACTGGTTCAACGCCTCACTGCTGAAAAAAGATGAAAGCGTCCATCAGTCTCCTGATTGTCATCTGTGGACTGACTAAAGCTTTGATTAGAAAGCATTTCTATCTAAATATCCAAATGAACTGGACTGATGCTCAGAGTTACTGCAGGAAATATTACACAGATCTGTCAACAGTCACAAGTCAAGAAGAACAAGACATGCTTATACAGCTAGCAAGAGGAAACCCTTTAAACAAATGGATCGGCCTGTATAGGAACACATCCAACATCAATCAGTTTCTGTGGTCTGATGGAAATTCATTTTTGTACTCTAAGTGGCAACAAGGTCAACCCAATAATGTTAATAGAAATCAGAACTGTGTGTTCTTACATTACAATTGGTTTGACTATGAATGTTTTAAGTTACAAACTTTTTTCTGCTATAAGATGGTCTTCAGTCTTGTTAAAGAGAAGAAGACATGGGATGAAGCTCTGCAGTACTGCAGGACTCACCACACTGATCTGGCCAGCATGACCACTGAGACACAATTACAGATGGCAAAACAAGTGACAGTGGAGTCCCAGACAGAAAGTGTGTGGACGGGCCTGCGTTTCCTGGTTGGAGAATGGTTCTGGGTCAACAACGAGCCTCTGGGGGATCAAACTTTACTGCCAGAGTGCCCAGCTCAACCCTGTCGTTGTGGAGCCCGCAACACAAACACTGACAGATGGGAGATCCGAGACTGTGCGGAGAAGCTCAACTTTCTCTGCAACTGAAAACAAAGGTGAAGAAGTCGAGTTAAAAATTAACAGTGATTTAGCTAAATTTATGTAAATGGACGTTAACAAATAAGAAAATAAA

Function

NR:

description
Si:dkey-28d5.13 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_03910844_03911566.mRNA True 950 mRNA 0.41 1 3910759 3911708

Neighbor

gene id symbol gene type direction distance location
CI01000049_03901904_03904746 NA coding downstream 5277 3899710 ~ 3905482 (-)
CI01000049_03889930_03891510 NA coding downstream 19055 3889737 ~ 3891704 (-)
CI01000049_03864331_03867898 TPT1 coding downstream 42792 3864009 ~ 3867967 (-)
CI01000049_03790418_03842410 PIBF1 coding downstream 68154 3789986 ~ 3842605 (-)
CI01000049_03782311_03782489 KLF5 coding downstream 128270 3781411 ~ 3782489 (-)
CI01000049_03926423_03936158 NA coding upstream 14654 3926362 ~ 3937709 (-)
CI01000049_03937868_03938590 NA coding upstream 26113 3937821 ~ 3939159 (-)
CI01000049_03944325_03944819 NA coding upstream 32581 3944289 ~ 3945258 (-)
CI01000049_03993313_03994107 NA coding upstream 80937 3992645 ~ 3994107 (-)
CI01000049_04094686_04123864 FREM3 coding upstream 182416 4094124 ~ 4124296 (-)
G208287 NA non-coding downstream 150703 3756903 ~ 3760056 (-)
G208246 NA non-coding downstream 233955 3641999 ~ 3676804 (-)
G207990 NA non-coding downstream 269208 3641141 ~ 3641551 (-)
G207980 NA non-coding downstream 277951 3631059 ~ 3632808 (-)
G208332 NA non-coding upstream 27888 3939596 ~ 3939797 (-)
G208413 NA non-coding upstream 252128 4163836 ~ 4164051 (-)
G208414 NA non-coding upstream 318163 4229871 ~ 4259908 (-)
G208459 NA non-coding upstream 381159 4292867 ~ 4293095 (-)
G208461 NA non-coding upstream 407504 4319212 ~ 4319433 (-)
G207278 NA other downstream 1921992 1987011 ~ 1988767 (-)
G206938 NA other downstream 3083114 825859 ~ 827645 (-)
G206850 NA other downstream 3277564 632680 ~ 633195 (-)
G206849 NA other downstream 3279183 631143 ~ 631576 (-)
G209491 NA other upstream 2116381 6028089 ~ 6028469 (-)
CI01000049_08056071_08059039 TIMM10.S, TIMM10, TIMM10.L other upstream 4143925 8055633 ~ 8059179 (-)
CI01000049_08452153_08453389 CISD2 other upstream 4539434 8451142 ~ 8454233 (-)
G211175 NA other upstream 4553585 8465293 ~ 8476265 (-)

Expression


Co-expression Network