Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000049_03926423_03936158 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000049 |
| NCBI id | null |
| chromosome length | 9665442 |
| location | 3926362 ~ 3937709 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| novel protein similar to lectins |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000049_03926423_03936158.mRNA | True | 2626 | mRNA | 0.43 | 2 | 3926362 | 3937709 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000049_03910844_03911566 | NA | coding | downstream | 14654 | 3910759 ~ 3911708 (-) |
| CI01000049_03901904_03904746 | NA | coding | downstream | 20880 | 3899710 ~ 3905482 (-) |
| CI01000049_03889930_03891510 | NA | coding | downstream | 34658 | 3889737 ~ 3891704 (-) |
| CI01000049_03864331_03867898 | TPT1 | coding | downstream | 58395 | 3864009 ~ 3867967 (-) |
| CI01000049_03790418_03842410 | PIBF1 | coding | downstream | 83757 | 3789986 ~ 3842605 (-) |
| CI01000049_03937868_03938590 | NA | coding | upstream | 112 | 3937821 ~ 3939159 (-) |
| CI01000049_03944325_03944819 | NA | coding | upstream | 6580 | 3944289 ~ 3945258 (-) |
| CI01000049_03993313_03994107 | NA | coding | upstream | 54936 | 3992645 ~ 3994107 (-) |
| CI01000049_04094686_04123864 | FREM3 | coding | upstream | 156415 | 4094124 ~ 4124296 (-) |
| CI01000049_04126260_04127962 | NA | coding | upstream | 187974 | 4125683 ~ 4130451 (-) |
| G208287 | NA | non-coding | downstream | 166306 | 3756903 ~ 3760056 (-) |
| G208246 | NA | non-coding | downstream | 249558 | 3641999 ~ 3676804 (-) |
| G207990 | NA | non-coding | downstream | 284811 | 3641141 ~ 3641551 (-) |
| G207980 | NA | non-coding | downstream | 293554 | 3631059 ~ 3632808 (-) |
| G208332 | NA | non-coding | upstream | 1887 | 3939596 ~ 3939797 (-) |
| G208413 | NA | non-coding | upstream | 226127 | 4163836 ~ 4164051 (-) |
| G208414 | NA | non-coding | upstream | 292162 | 4229871 ~ 4259908 (-) |
| G208459 | NA | non-coding | upstream | 355158 | 4292867 ~ 4293095 (-) |
| G208461 | NA | non-coding | upstream | 381503 | 4319212 ~ 4319433 (-) |
| G207278 | NA | other | downstream | 1937595 | 1987011 ~ 1988767 (-) |
| G206938 | NA | other | downstream | 3098717 | 825859 ~ 827645 (-) |
| G206850 | NA | other | downstream | 3293167 | 632680 ~ 633195 (-) |
| G206849 | NA | other | downstream | 3294786 | 631143 ~ 631576 (-) |
| G209491 | NA | other | upstream | 2090380 | 6028089 ~ 6028469 (-) |
| CI01000049_08056071_08059039 | TIMM10.S, TIMM10, TIMM10.L | other | upstream | 4117924 | 8055633 ~ 8059179 (-) |
| CI01000049_08452153_08453389 | CISD2 | other | upstream | 4513433 | 8451142 ~ 8454233 (-) |
| G211175 | NA | other | upstream | 4527584 | 8465293 ~ 8476265 (-) |
