CI01000049_04644316_04648048


Basic Information

Item Value
gene id CI01000049_04644316_04648048
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 4644300 ~ 4648729 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_04644316_04648048.mRNA
ACTGGGCCCTCCAGGAGGTGAGCTTCACGGGGCGATGAGAGACCTGTCGGGGGTGTGGGGATGTGAGCTCCATTTAGACGTGTCTATCTCAGGAGGAGAACGCTGTTGACTCTCCCCTATCTCCTTTGCCTTTGGAGACAAAAGGCATGCAAATATTTGGTGTGCTGCTAAGCCCCACAGAAGCATATTCAAAATGTCAGGGTGGTTATTTTCTGGCAAGGTGGCTCATCTCTGAACAGCTGGATTCAGTGGGATGGGCCGCTGCCTGTTGAGTGGCTCCCAGACGGTGAAGGGTCCCTAACTTTACTCGTAATGGCTCTCTGAGGGAACAGCTTGCTGCCTGAATGGGTGCAGACAAGACCATCACCACAAGTTTGAATTAATGTGAAATAGGTTGTGATTTTTCTAAAAGTAATATTTAGTAAATAAATGCATTTAGTAAACTGGACAAAATTTTAAATATGATAAAATAAATCATGATGTGTTTGAAAATTTGGAAAAACCTCAGTGAATAGTCGTATAGTTTGTGTCTGTATGTTTTTTTTCTTCTCTTTCTGTCTTGTTTTCTTTCTCTCTGATTCCCTCTTTGAGCTCTGATCAGGAGCGAGCTTTCTCATCGCCCCTGGGGAGGCTGCGGGGCTTCGGTCAGCCATATGGTGTGAGTGCCCTGCCCCGCCCTCCATGACAGCCCTGGAGGAGCGGCTTGATGAGGCTGGATCAGACCCACCGCTTCCTGATGGAGAGGACAGCTCAGACAGAACACAGGCAGAGACAGCCAGGGAAGGAGCACAGACAGAGGATCCAAGTGCAAGAATAACAATATTTATTGACAGGAAAATGCTGTACAATAACTTCACTCCAAGGGTCAGTCGAGGCAGAGGCTGTGGCGTGCAGAGTGGCGAGGCACTGGGTGGCGCAGGGCTACAGCTGGTATCAGAGAACAAGGATAATCCAACCCAGAAAACAGGGCACACGACGAAAGTCCAGAATCCAAAAACCAGGAAGAAACACACAGAGAACACGACACCGGGAACAGCCTGCAACGAACTGACAAAGACCACATAAAGACATGCACAATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_04644316_04648048.mRNA True 1081 mRNA 0.48 2 4644300 4648729

Neighbor

gene id symbol gene type direction distance location
CI01000049_04453790_04454764 NA coding downstream 188283 4453420 ~ 4456017 (-)
CI01000049_04386375_04434840 ZNF827 coding downstream 209460 4386375 ~ 4434840 (-)
CI01000049_04380746_04381576 NA coding downstream 261492 4378852 ~ 4382808 (-)
CI01000049_04341160_04342702 NA coding downstream 301598 4341058 ~ 4342702 (-)
CI01000049_04296486_04310931 SMAD1.L, SMAD1, SMAD1.S coding downstream 331193 4295126 ~ 4313107 (-)
CI01000049_04693311_04693646 NA coding upstream 44557 4693286 ~ 4694727 (-)
CI01000049_04737253_04749045 PRMT9 coding upstream 88397 4737126 ~ 4749045 (-)
CI01000049_04819077_04825635 NA coding upstream 169880 4818609 ~ 4825635 (-)
CI01000049_04830811_04848245 NR3C2 coding upstream 181107 4829836 ~ 4848501 (-)
CI01000049_04907578_04909938 NA coding upstream 258716 4907445 ~ 4910923 (-)
G208617 NA non-coding downstream 56217 4587758 ~ 4588083 (-)
G208537 NA non-coding downstream 122522 4521314 ~ 4521778 (-)
G208513 NA non-coding downstream 136228 4507762 ~ 4508072 (-)
G208512 NA non-coding downstream 136703 4507337 ~ 4507597 (-)
G208510 NA non-coding downstream 138272 4505799 ~ 4506028 (-)
G209057 NA non-coding upstream 27163 4675892 ~ 4718432 (-)
G209058 NA non-coding upstream 54047 4702776 ~ 4704629 (-)
G209092 NA non-coding upstream 72228 4720957 ~ 4721186 (-)
G209066 NA non-coding upstream 204433 4853162 ~ 4897900 (-)
G209128 NA non-coding upstream 296622 4945351 ~ 4945565 (-)
G207278 NA other downstream 2655533 1987011 ~ 1988767 (-)
G206938 NA other downstream 3816655 825859 ~ 827645 (-)
G206850 NA other downstream 4011105 632680 ~ 633195 (-)
G206849 NA other downstream 4012724 631143 ~ 631576 (-)
G209491 NA other upstream 1379360 6028089 ~ 6028469 (-)
CI01000049_08056071_08059039 TIMM10.S, TIMM10, TIMM10.L other upstream 3406904 8055633 ~ 8059179 (-)
CI01000049_08452153_08453389 CISD2 other upstream 3802413 8451142 ~ 8454233 (-)
G211175 NA other upstream 3816564 8465293 ~ 8476265 (-)

Expression


Co-expression Network