CI01000049_04693311_04693646


Basic Information

Item Value
gene id CI01000049_04693311_04693646
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 4693286 ~ 4694727 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_04693311_04693646.mRNA
AGATATTTGTAAATGTTATAAAAAGGAATTGATGAAACTAGTAGAAGCTTTTTGTTATGTTACTGTATATTGCGTTGTTGAGGGAGTACACTACGGTTAAAAAGTTTGGAGTCAGTAAAATATATATTTAATTATCTAAAGACCTTAATACTTCTATTAAGCAGCAGTGCATTAAACTGATCAAAGGCAAAAGTAAAGACATTCATAATGTTATAAAACTTTCTAATCAAAGAATCCTGAAAAATAAATGCATCAGTTTCCACAAAAGTATTAAAGGGTTAATTCACCCAAAAATGAAAATTCTGTCATTAATTACTCACCCTTATGTCGTTCCAAACCTGTAAGACCTTCGTTCATCTTCAGAACACAAATTAAGATATTTTTGATGAAATCCCATGACTCAGTGAGGCCTCCATTGCCATCAAGACAATTAACACTTACATTGCACTTATATATAATCAGAGGTTCGGAGCATGAATCAAACTGCCAAAGTCATGTGAAATATTGAACTTTCACACTCCGAACCTCTGATTCGAAACAAAAGATTTGTGAAGCTTCAAACAAAGGTCTTACGGGTGTGGAACGACATGAGGGTGAGTAATTAATGACAGAATTTTCATTTTTGGGTGAGCTAACCCATTAAGCAGCACAATCATTTTCAAAATTATATATAATAAGAAATGTTTCTTGAGCACCAAACCAGCATATTAAAATGATTTCTGAAGGATCATGTGACCCTAAAGCCTGGAGTAATGGCTGCTGAAAATTCAGCTTTGCCAACACAGGGATAAAAAAAAAAATTAAAATATATAAAGAAAACAGTTATTTTAAATCATGCTAATATTTTATGACTACTTTTTTTTTTGCTGTATTTTTGATCAATATCATTATCATAAGCATAAGAGACTTCTTTAAAAAATATATAAATAACCCTTTCCAAGCACATATCCCAGGGTACTAATCAGCAGATGTCTGAAGGATAATGTGACAGCAGATACAGACAAAACAAATTTATAAACACTTTTTTTGGTAAAATTTATTATTTTAGGGTCTTTTAACTAGTTGCTTATTAGCTGTTACAATGGAAAAAGGACCCAAAAGCAAAGCAGGTTTCAGAGATTTATTTAACAGCAACAAACGTCAAATAAGACAGTCTGCCGGTCCTCGGCCGTCTTTGGCAGGCGCAGAACTGGTGAAGGAAACTCAAAAGGAAAGGCTGAAAGCAGACGGGACGTTGAGCACAGGTAGCAGCAGTCAGAAAGAGACGACGAACACTCAATCCTCTGGGCAGATACAGCAGCGCGGTATGGCAGACTTGCAGGCAGAATATAACAGACGAAGGCTCACTCTGGACACACTCACAGGACGGGACAGGACTAGACAAGCAGAGGTAGATCACAAAGTAAAGCGTCTGTAACTGGTATGAAAGGCCAAACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_04693311_04693646.mRNA True 1442 mRNA 0.36 1 4693286 4694727

Neighbor

gene id symbol gene type direction distance location
CI01000049_04644316_04648048 NA coding downstream 44557 4644300 ~ 4648729 (-)
CI01000049_04453790_04454764 NA coding downstream 237269 4453420 ~ 4456017 (-)
CI01000049_04386375_04434840 ZNF827 coding downstream 258446 4386375 ~ 4434840 (-)
CI01000049_04380746_04381576 NA coding downstream 310478 4378852 ~ 4382808 (-)
CI01000049_04341160_04342702 NA coding downstream 350584 4341058 ~ 4342702 (-)
CI01000049_04737253_04749045 PRMT9 coding upstream 42399 4737126 ~ 4749045 (-)
CI01000049_04819077_04825635 NA coding upstream 123882 4818609 ~ 4825635 (-)
CI01000049_04830811_04848245 NR3C2 coding upstream 135109 4829836 ~ 4848501 (-)
CI01000049_04907578_04909938 NA coding upstream 212718 4907445 ~ 4910923 (-)
CI01000049_05074257_05076805 NA coding upstream 378231 5072958 ~ 5076805 (-)
G208617 NA non-coding downstream 105203 4587758 ~ 4588083 (-)
G208537 NA non-coding downstream 171508 4521314 ~ 4521778 (-)
G208513 NA non-coding downstream 185214 4507762 ~ 4508072 (-)
G208512 NA non-coding downstream 185689 4507337 ~ 4507597 (-)
G208510 NA non-coding downstream 187258 4505799 ~ 4506028 (-)
G209058 NA non-coding upstream 8049 4702776 ~ 4704629 (-)
G209092 NA non-coding upstream 26230 4720957 ~ 4721186 (-)
G209066 NA non-coding upstream 158435 4853162 ~ 4897900 (-)
G209128 NA non-coding upstream 250624 4945351 ~ 4945565 (-)
G209131 NA non-coding upstream 255359 4950086 ~ 4950377 (-)
G207278 NA other downstream 2704519 1987011 ~ 1988767 (-)
G206938 NA other downstream 3865641 825859 ~ 827645 (-)
G206850 NA other downstream 4060091 632680 ~ 633195 (-)
G206849 NA other downstream 4061710 631143 ~ 631576 (-)
G209491 NA other upstream 1333362 6028089 ~ 6028469 (-)
CI01000049_08056071_08059039 TIMM10.S, TIMM10, TIMM10.L other upstream 3360906 8055633 ~ 8059179 (-)
CI01000049_08452153_08453389 CISD2 other upstream 3756415 8451142 ~ 8454233 (-)
G211175 NA other upstream 3770566 8465293 ~ 8476265 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_028722 NA non-coding NC_007115.7 CM002888.2 18712763 ~ 18714926 (-)