CI01000049_06665198_06670691 (STOX2A, STOX2)


Basic Information

Item Value
gene id CI01000049_06665198_06670691
gene name STOX2A, STOX2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 6665001 ~ 6671560 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_06665198_06670691.mRNA
ATGGTTTGGATAATGCTGACTCAGTTCTCACTATTAAACCCCATAGTGTTTGTAACTTTTACACTGGGAATACATGGAGTTTATCAGGTGTTTCAGACAGACGTTCTGCATATAGTATTTCATTTGCAGTTTAATATCTATATGAAAGGATTTGATGTTATTCTAAATTTCAAACTGCAAATAATATAGTGGATATGCTTATTTTAATAATGAGCTGGACAATAGTACATAAATTATATCAAATATTCCAATATTGTATTTCATTTTTGTGTCTTTATTATATTCCATTATAACTCAAAAGTCATTCCAGTGCATTTTAGTTTTAATGAAAAGGTGCGAAAGTGAAGCATTATCTCTCAGATGTATTATGTGATATAACATGTTTGATTGCTCTGAGCTGTATTTCTAGTAAATCCAACATGCATGGGTGCTTTTTTGGGATCAATATTGACGCATGGCCTGGGGTCTTTCTGCCTACGCAGGCAGAGGGGCTTATCGCTGAGTCGTCAGTATAAGGTCACATTTGGCAACACGTGATCACACACCCTGGATGACCCTCATGCTGCTGTTGTGACCGTATAGCATCTTGAAATCTCCTCCATGCCCCTCCCTGGCCTCAAACTCCTCCTTTCTCCTCTCTCTCCATCTTAACAGGTCCCACATTAATACTATTGGAGACATCTTGAACTCATAATTATCCTTAGGGGTTTTTATTTTGTTGCTTGCATGTTTGGCAACTGATTGGTCTGTAAATGTCAACTTTTTTAATGCAACACAAACATGATCTAGTAAAGTAGGACTGAACATTATTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGGCGATGTATCTCCAATCAGTATGTCACCCATCAGTCAGTCTCAGTTTATCCCACTGGGAGAGATTCTGTGTCTGGCCATCTCAGCCATGAACTCTGCCCGCAAGCCTGTCACACAAGATGCGCTGATGGAGCACCTTGCCACCTGCTTCCCGGGTGTACCCACTCCGAGTCCAGAGATCCTGCGGCACACACTGAACATGTTGGTACGGGAGAGGAAGATCTACCCCACACCAGAAGGTTACTTCATTGTTACTCCACAGACCTACTTCATCACCCCGTCCCTCATCCGCACCAACAGCAAGTGGCCTAATCCTAAGAACCACTGCGACTCCTACAATGCCTACCGCGATGAGGTGCCCAGCATTCATACCTCCACAATTCAAAGGAAATCCCCAAAAGAACCCAAAGGAGATCCCCCTTCATACCCACAACCCCCACCTCCTCCACCTGCCATTCAGCACCCACCTGACCCAACCGACAAGAACAAGAGCATGACCGCCACCTTCTCTTACAAGACAGACACGCTAACCAAGAAGAAGGAGGGCAGTGGTGGGGGCAGCAGTGAGAGGCAGTCTAAGAAGTTTGGGCTGAAGCTGTTCCGCTTGAGCTTCAAAAAGGACAAGACCAAACACCTGGCCACCTTTTCAGCACAGTTTCCTCCAGAGGAGTGGCCCTTGAGGGACGAGGACACACCGTCGGCCGCAGCGATCCCTCGTGAGGTGGAGATGGAGATCATCCGCCGCATCAACCCAGACCTGACAGTGGAGAACGTGGCCCGTCACACAGCTGTCATGAAGCGGCTGGAAGAGGAACGAGCTCAGCGCTGCAAGGCCAGCTCATCCGCACAGCACAGTGCCCGCAGTCGCCGTAGCCGAGGTCACCGGCGTGTGCCACACGGGAAGTCGCGTTCGCACAGCAAGACGCGAGCTTCTCGGGGAGACCCCTCAGAGGGCTCCAATCTGGACCTGCCAGCAGTCAGCCTGGAGAGGGACTACCGTTTTTTCAGCCATTCTCTGGTACGCTCGCCAAGAGAGGGAATGTACACGATGGAACGCAGAAGCGGTGGTGCCTATCTTGTCCACAGCAACCCCAACATTGCTGAGTCGCACTTTCCTGTCACCCCAGAGTGGGATGTTTCAGGGGAGCTTGCAAAGAGGCGGACAGAGATGCCTTTCCCTGAGCCTTCACGTGGGACATCACATTCTAGAGTGCACCGGAGCCACAGCCACACTCAGGACCGCAAGTCACGCAACGAGCGGCCCGATAAGGCTAAAGAGCGATCGCGTTCTATGGACAACTCCAAGGGCCCGCTGGGAGGTGGGAGCTCCACGCTTGGCACGGCTGAGGATTACGACCGCAGTCCCGATGACAGAAGCCGCTACTATACCGACGATGGGACGCTGAGGGCCTCCTCTCAAAAGGCCCCGCACTACTCATGCATCATGTTTTCTGCTGCCAAGTTTAGCTCTGAAATGTCTGTACTTGATATGGGCAAAATGAGTTTGGATGAATCGAGGCTCTGTAGCCCTCTAGAACGGAACAAGAGCAGGGACAGCCTCCCAGCCTATAGTGACCTAAAGGCCCTGTCGCCAAAGCCTTTGGCTGATGACTACTTTCAGTGCAATACATCGAATGAAACAATCCTTACTGCCCCGCTGCCTCTGGGCAAATCTGACCATGACACTTTAACCCCATCTGACGGAATCCGCAAGGGCTCTCCAGCTGACCGGCAGACACCGCACCTCACCTCTCCTCACCCCTTGGAGTACAAAGAGGACTCCTCCACCAAGGGGCACAACGGTTCTGGCAAACCCACACCGAGCCAGACCCCTGAGCCTATGCCCAATGGACGTTTGATACAGCACCAACACAACACTGACCCAGGGGGCGGGGGAGGTGGTGGTAGCACTGGTGGCGGGGTGGACAAGAGGAAAGAGATTTTCAGTAAGGACACTTTGTTCAAACCGCCACACAATGTTTTGACTGTGAGCTATGTGGACAGTGGCTACTCAAAGTCAGGCACTTTGCGTAAGACTCCGCACATGAAATCATCCGAGGTCCTTGACACTCTGGAGACCCAACAGCCACCTAACTCCACCCCTTTGTCTGCTTCTGCCCCAGCACCTACAGGCACAGATCAGGGTGCTCCCTCCACATCTGAAGCTGCTTTTGACTATTACAACGTGTCAGATGATGACGATGAGGAGGAGGGAGAGGAGGCCTCCCATAAAGAGGCGGCCCCGACAGAAACAAAGGGGCGGGCAGGGGCCGGAGATAGTGGCGGAGGTGGTGGGACCATGCAGTGGTTGCTAGAACGGGAGAAAGAGCGGGATTTACAGCGGAAGTTTGAGAACAACTTGACTCTGCTTAGCCCTAAGGAGAGCGAGAATAATAACAGCCAAAAGACGGCTCACTCGGCACGGCTGGACAGCATGGACAGCAGTAGTGTGACTGTAGACAGTGGGTTTAACTCCCCTCGGTAAGTCCTCACTTCATAGACAGAAGATGCTACAATTGAAAACTCATATTTGAGTGTACATTGTCAATTGTTGATTGTGAACCACTGTTTAGTGCATCAGTTTATTGCCATTCTTCTATGTTCTGTTCTGTTCTTTTTATTATTACCAAAGTCATAAGATTATTTACTATTTAATATAAATGGCTAATGTGCTGGATTAAA

Function

symbol description
stox2a Predicted to act upstream of or within regulation of transcription by RNA polymerase II. Orthologous to human STOX2 (storkhead box 2).
stox2 Involved in embryo development and maternal placenta development.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_06665198_06670691.mRNA True 3529 mRNA 0.50 3 6665001 6671560

Neighbor

gene id symbol gene type direction distance location
CI01000049_06650349_06653460 TMEM134 coding downstream 11208 6650243 ~ 6653793 (-)
CI01000049_06621205_06636088 NA coding downstream 28913 6621189 ~ 6636088 (-)
CI01000049_06427734_06436267 NA coding downstream 228016 6427581 ~ 6436985 (-)
CI01000049_05926968_05969885 VEGFC coding downstream 694879 5926683 ~ 5970122 (-)
CI01000049_05901108_05909136 ASB5B, ASB5 coding downstream 755816 5900660 ~ 5909185 (-)
CI01000049_06700427_06705942 NA coding upstream 28359 6699919 ~ 6705988 (-)
CI01000049_06706525_06706716 NA coding upstream 34592 6706152 ~ 6706716 (-)
CI01000049_06710434_06714364 ING2 coding upstream 38311 6709871 ~ 6714364 (-)
CI01000049_06722991_06725403 CDK2AP2 coding upstream 50792 6722352 ~ 6725403 (-)
CI01000049_06755408_06757240 NA coding upstream 82934 6754494 ~ 6757862 (-)
G210957 NA non-coding downstream 12992 6651800 ~ 6652009 (-)
G210952 NA non-coding downstream 27360 6637200 ~ 6637641 (-)
G210950 NA non-coding downstream 39036 6625726 ~ 6625965 (-)
G210948 NA non-coding downstream 40900 6623865 ~ 6624101 (-)
G210946 NA non-coding downstream 42326 6622393 ~ 6622675 (-)
G210809 NA non-coding upstream 6986 6678546 ~ 6714095 (-)
G210961 NA non-coding upstream 66753 6738313 ~ 6745633 (-)
G210970 NA non-coding upstream 120219 6791779 ~ 6792098 (-)
G210972 NA non-coding upstream 130096 6801656 ~ 6801873 (-)
G210975 NA non-coding upstream 151407 6822967 ~ 6823173 (-)
G209491 NA other downstream 636588 6028089 ~ 6028469 (-)
G207278 NA other downstream 4676234 1987011 ~ 1988767 (-)
G206938 NA other downstream 5837356 825859 ~ 827645 (-)
G206850 NA other downstream 6031806 632680 ~ 633195 (-)
G206849 NA other downstream 6033425 631143 ~ 631576 (-)
CI01000049_08056071_08059039 TIMM10.S, TIMM10, TIMM10.L other upstream 1384073 8055633 ~ 8059179 (-)
CI01000049_08452153_08453389 CISD2 other upstream 1779582 8451142 ~ 8454233 (-)
G211175 NA other upstream 1793733 8465293 ~ 8476265 (-)

Expression


Co-expression Network