XLOC_009541 (CABZ01068246.1)


Basic Information

Item Value
gene id XLOC_009541
gene name CABZ01068246.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 45338623 ~ 45356635 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018703
TTTGTCACAGCCTttgcggttggaagggcagccgctgcgtttagcacataTGTGCAGTGTTACGACTGGGGTGTGCGGAGCGAGGGTTCGGTGCGGGTGTACGAGGGCGAGGTGGTGCCGCTTTACTGTCCTCTGTTTTCTCACCCGACACTCTATAACTACAGTCAGACTCAGAACAGCAGCCTGTCCCTGCTGTGGTaccggcacacacacacacaagagctgGAGCAGCCCATCAACCTCAAACTGCACACTCTGCACAAAGAGAAAGAGTATCTGTGGATCCAGCCGGCCGCCGCGCAGGACGCCGGACTCTACATCTGCATGCTccgtaatCTTTCATCATGTGTGAAGATCGGTGTGGAGCTGGAGGTTGTTCATCGGGAAGGCCACTGTGACCCCAAAGCTGAAGCTCATCTGAACATGACCATCCCCATCCAGAGCGACCGCAAGCTGCAATGTCCCGACCTCAACACACTCACACTGCCTAACAGCACTCACTCCGTCATCTGGTACCATGTGAGTCCCAGAGAGATACACACACTCAACACAAAGCATGGGCTGGTAGAATATACTGACGGTGGGAAAGTCttggataaaaaaaatcacagtttcaCTtcctctcagggcaTATTTGTGCAGGCGATATCGTTCATTTCAattcttcatcacattggcagaagccaatcatatgcgtttagagatggaaaaagaattgatctgctcacctctcgagtcctctatcggATGACTTATTATGGTGATAAGACGAAAGAGCGATTGCTGTATGTGATGGATTTTTCAGCTGATGACCTGCAGAGGGAGTTTAACTGTTCTGCCAGAAACAGACACGGCTTCAACACCAGCAGAGCACGACTCAAAGCTGAaccatatGTGCCGACGCTGGAGCTGAGCTGTGGTTTAGGGGTGACGCTAGCACTCATGTTGATGATGTTCGTCATTTATCACGTCTTCTGGCTGGAGCTCCTGCTGCTCTATCGCTCCTGGTTCGGCTCTGATGAGAGATACACCGATGAGAAGCAGTATGACGTGTACATCTCATACGCTCGTAACAGTGAGGAGGAGCAGTTCGTGTTGTCCACACTGCGTCGCGTGCTGGAGACCGAGTTCGGCTACTCCGTCTGCATCTTCGACCGCGACAGCCTTCCTGGAGGAActATAACAGATGACACTCTGCGGTTTGTGGCTCAGAGCAGGCGTCTGGTGGTAGTGGTGAGTCCTCTGAGTGCGGTGCGGGGGACGCAGGCTCTGCTGGAGCTTCAGGCTGGTCTCTCCAGCATGCTGCGCGGCGGGAGCCTCCGGGTGGTTCTGATCCAGTTCAGAGCCGTCCGGAGGAAGAGCTGGGCCAAAGAGCTGCGGCGCGCGAGACTGGCGCTCACACTCATCCGCTGGAAAGGGGACAAGTCTGAGCCGCTGTCCTCACGCTTCTGGAAACAACTCCAGCTCGAgttgtgcaaggattgtagacttagggctctattttga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000114719

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018703 True 1506 mRNA 0.53 10 45338623 45356635

Neighbor

gene id symbol gene type direction distance location
XLOC_009540 CABZ01068244.1 coding downstream 18150 45311936 ~ 45320473 (-)
XLOC_009539 NA coding downstream 25584 45300527 ~ 45313039 (-)
XLOC_009537 DYNC2H1 coding downstream 91712 45008585 ~ 45246911 (-)
XLOC_009538 NA coding downstream 146508 45191684 ~ 45192115 (-)
XLOC_009536 CABZ01037147.1 coding downstream 587993 44750514 ~ 44750630 (-)
XLOC_009542 NA coding upstream 8612 45365247 ~ 45407049 (-)
XLOC_009543 fgf12b coding upstream 58248 45414883 ~ 45510977 (-)
XLOC_009544 MB21D2 coding upstream 170646 45527281 ~ 45538773 (-)
XLOC_009545 NA coding upstream 201532 45558167 ~ 45560856 (-)
XLOC_009546 CABZ01067232.1 coding upstream 312216 45668851 ~ 45674213 (-)
XLOC_009530 NA non-coding downstream 944849 44370567 ~ 44393774 (-)
XLOC_009528 NA non-coding downstream 1215516 44119233 ~ 44123107 (-)
XLOC_009547 NA non-coding upstream 419558 45776193 ~ 45861721 (-)
XLOC_009548 NA non-coding upstream 854348 46210983 ~ 46213819 (-)
XLOC_009549 NA non-coding upstream 900910 46257545 ~ 46268918 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000147_00546348_00552951 NA coding CI01000147 null 544167 ~ 552951 (-)