CI01000049_08161528_08162817


Basic Information

Item Value
gene id CI01000049_08161528_08162817
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 8161050 ~ 8165658 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_08161528_08162817.mRNA
AGCTGTTGTCTGTATGCAATAGGAAAACAAAAATTATGAACAGCAGAACTGTCATGTTGTCACGATCACTGTCTGTTCCTGTCAGTTCCTGGACTCCACTTCCCATAATCCTCCCTTCCAATCACATGCACCAATCACCAATTGCCACACACACCTGCAGATCATTACCTGGACTATTTAAGACACACACACACACACACACACACACACACACACACACACACACACACACACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCACCCCCTCCCCCTCCCCCTTTGCGAAGTCTTGATTTGCCCTGGTGATCTTTACTAAGCGTTTTCTTGTGGACTGTTTTCCTGGTTTCCGTTTGGATTGTTTATTCTTTGTGATTCTCTGCTGCCTGCCCTGATCTTTGCCTGTTTCCTGGACTGTGATTGTTTGCTGCCTGCCCTGATCCTTGCCTGTACCCTGATTCTGTTTGTCTGCCGCCTGCCTCGACCATTGCCTGCCCTTGTTTATGTTCCTGCCTTTGCCCCTGTCTACCTGTGTAAATACTGTTCTCAATAAAGCTTGCAAATGGATCCCCGCTCTGCCGACCCATCATTACAGAAGACTTCGCCAAAACCGTTACTGGGAGGTGGAGTGGAGTGGAGTCCAGGAACTGACAGGAACAGACAGTGATCGTGACACATGTGACAGAAGGACCTACTCTACGGCCACTACCACTAACACCTACTCCTTTCTACAGTTCTTTATTGCTTCTTACTATGATACACCCTGTCCTTTGAAAACTACAGTACAAAATTATGTTTTAGACACAGGAATGAAAAAAAAAAAAAAAAAAAAAAAAATCACCTGAAATCCCATGATACGTCACTTGCATAATAATTCGAAACACAGTATAAATAAAAAAAAACTGAAGCAAAATAGAAGCATAATGGAAATAGACTAGTGATGTCAAACTTTTGGACCCCATTGTATGTCATAAACAAAATCTATTTTCACTGATTCTTTGCTAAAATATGATTACACAGAATAATTAATCTATATAATCACTGAATTTTTCAGGCAATTTCTCCTGAAGACCAATCTTTATGTCTTAGGTGAGTAAACACCTGCTGTGTTACATTATAATTTACATGAACCTGACTGCTCACTCTTCTTTTTTCTAAGATTTTCTTTGATCTTCCCACAACCCTTTCCATGTTTTTCTAAGTAAATGTTGTTGTTGGAGAGACTCATTGAGGCAGGCCATGACATGCTCAAGTGCCCCATGGCAAGCTTTTTTCCAAGGAAAAAATGAGATCCATTATCAGTCCTGAATGAAACTGTAGTAGTTTTACATCATCAACACCAAGATTCTCCTGAGGAATATTAACCGCAACAACCCTTTTATGAATGACTGATGGAGGATGTGCGAATGGTAGTCATCGTACAGTGATCATTTCTACTAAAACATCAATTACTCTGTAAGTGTGAGATAAGTACCTATTTATAGTAATACCAATAATGAATCTTGATCTCAACACTATAACATGTATCACTATGAAAGCCTTTGTTTTCAGATACTGTAAATTAATGTAAAATTTATGTGTTTTAAATACTATGTAAGAGAATGAGTGAATTTGTTCATAAACTATAGTCTGCCTGCTGTTTTGTTTTTTTGTTTTTTTTTTTGACTCAGAAATAACAACATAAAACAAAATCCAGTGATAAATGCTGTGACTCGGTCATCCTTACACATGCCTAAACCAAGACAAAATTTCAACATACCTCAGGATGATGTTATTGTAGAGAAGTCTTGGATGAAAGTGTTTTGAAGTCAAAATAGCGACAGCAGAAACCTCACAGACAGGACTAACACAGTTAAGAGACTAAGACGGTTCATTAGAGTATTACTGTAAATGCAGTTAAGTAGACAGTCTGCTAAACTTCAAAGCTCATCTGATTATCAGTATTCACCACAGCTTCCTATTTGCTTGTTTTCACATTCTCTACTTCTTCCTTCATCTTTTTTTGAAATTGTTGGAAAATTTTCTGTTGTGAGAAATTTGTAAACTCTTTTTGTGATCTACATAGTTAACTTAGTATTGTCACTGTCAAATTAACTGGTATTTTAATTTAAAATGATTTAAAGGATTAAATTATTAAAAGAATTATTAAAATGATTTCTGAAGGATCATGTGACACTGAAGACTGAAGTAATAATGCTGAAAATTCAGCTTTGCCATCATAGGAATAAATTACATTTTGAAATCTATTGAAATAGAGCAGGTATTTTAAATTGCAATAGTATGTCACAATATTACTATATTTTTATCAAAAATGCAGCCTTGGTGAGCATAATACACTTCTTTCAAAAAAATCTCTTAGATCAAATAATAATTGTCAAATCCACTACAATACCACCGCGGACCCCAGTCTTAGAAGATGTTAAACTTTAAGAAAGAACAAGAAACACATTTCAAGCTTACATAATAAAGGTTTCATTTTTTGATCCATGTGCTTCATTTTAGATGGCTGTAAAAAATATATTAATATTTTTTCTCTTTTTTTGTGACAGCAATGACTTCCTCATTCTCTCCTAATTCCTCCCTCGGCCACTCATCCACCTCGGAGCTCCACTGTCCCCTTCTGCAGACAATGATCTCTCACACCCTGAACAATGACACTCGAGTGAACCTGGCAGTGGTGAGTGTGCATGGTGTGGTGTCCACTCTGGGGATCCTGGAAAACGGACTGGTGCTGTGGGTGCTTGGTTGCCGTCTTCGTCACAAGACAGTTGCGGCAGTGTGGGTTCTTAATCTGGCGCTGTCGGACTTCCTAACCACACTAACCTTGCCGCTTTTCACTTATTACCTACTGATGGACCACAGCTGGGAGTTGGGCGGACCATTGTGTGTGGCCCAGGCCTCAATCTTTTTCATCAACATGTTTGTTTCTGCCTTCCTATTGGCTGTGATATCGCTGGACCGTTGTTTGTTGGTGACTAAGCCGGTGTGGACTCAGAACCGTCGCACTGTGTCGGCAGCATGGAAGATCTGCGGCCTAGGATGGGCGCTAGCGGCGGTTAACGCGATTCCTTATTTCATGTTCCGTTCCGTCGTGCTTAAGCAGGACGGCCGCAAACTTTGCTATCATAATTTTGCACTCTATTCCTCCCAGAGCACGCTGCATAACAACTGTAAGGTGCGTCAGGCTGCGACAGCAGTGTCCAAAGCGTTGCTGGCGTTTGTCGTGCCGCTGTTGGTCATTGCCGTCAGTTACGCATGCTTTGTTATAGAGCTGCGGGCTCGCAGGAAGAGGCTTGAGAGCAGACGGCAGGGTGTAAGCAATGGCAAACAGAGATCCTCAAAATTCTTCCGCAGCCTGTACTCACCAGGCAGACAAAACAGCACTCAACTCTCGCAAGGTTTCACGAAAATGGTCGTCTCTGTGATCGCAACCTTTATTCTCTGCTGGCTGCCCTACCATGTTTTCTGCTTACTGGAAGTGACGGCTCAGTACAAGACAGAGATTGTGGATCGGGTGGAGGTGTCCTTACCTATCGCAACAACATTCACTTTCCTGAACTCTGTGTTGAATCCAATTATCTACACATTTAGCTGTCCAAACTTCTGCACTCGAATCCGCCAAAGTCTAGAGGTGCTTTACGAAGGGCTGGTGGAGGAAGTTGGGCCATTAATGCTGGTTACTGAAAGAATGAGGAAAAAAGATATATGGTCTTCCATTTCACTCAGCTCTCCAACCCCTCCCAGAGTTCCCCGCATCCAGCATGACTCCCAGGGCTCCATCAACCTCCTCGGCTTTAAAAGCCGTCCCACAAATGAGATAGAAAGAGATGACAAAATGTAACTTCATCATGTAATTAACATTACCTGGTATTGACACCTGATGTTTCTGAATGGACTACGGTCTACCAACTAGAGGTTACATTCATGGGATGGCCTTATAAGCCTTTATCTTTTTCTCTGTCTCTTTCCTGGTTTGATTTAAGCCATAGTCATACTGGATTATCTCTGAGGTTGTTGTGATTTTGAGAATATTAAAGAGAGTATGTCCTTGCCACTGCTGAAAACAAATGAACTTAAAACAAAAATCCCTCAATCATAGACAAAGAAACATGGCCCATATTCCTGTCTCTGTTCTCTCACATTGCTCAGATTACTGACTATATATAGTATATGTACACACACACACACACAAAATTTCTGCTAATTTTAACCCAGGCCACTCAGGCATTGTCTTTTTATCAAGGAAAAAACTACTTTAACTAGATTACAGACTAGAAACACAACTTTTAACTAGAAAACATAAACTACTGTACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_08161528_08162817.mRNA True 4609 mRNA 0.38 1 8161050 8165658

Neighbor

gene id symbol gene type direction distance location
CI01000049_08144659_08148556 NA coding downstream 12379 8143943 ~ 8148671 (-)
CI01000049_08116401_08122069 CABP2 coding downstream 37805 8116401 ~ 8123245 (-)
CI01000049_08073333_08087714 CTNND1 coding downstream 73336 8072960 ~ 8087714 (-)
CI01000049_08060396_08065330 NA coding downstream 95484 8060396 ~ 8065566 (-)
CI01000049_08056071_08059039 TIMM10.S, TIMM10, TIMM10.L coding downstream 102011 8055633 ~ 8059179 (-)
CI01000049_08232963_08241161 NA coding upstream 66302 8231960 ~ 8241252 (-)
CI01000049_08452153_08453389 CISD2 coding upstream 285552 8451142 ~ 8454233 (-)
CI01000049_08789547_08818204 DKFZP459D223, CTNNA2 coding upstream 623248 8788906 ~ 8818620 (-)
CI01000049_08830382_08866592 NA coding upstream 664152 8829810 ~ 8866592 (-)
CI01000049_08933235_08933525 NA coding upstream 767142 8932800 ~ 8933535 (-)
G211361 NA non-coding downstream 45183 8115469 ~ 8115867 (-)
G211360 NA non-coding downstream 45664 8115157 ~ 8115386 (-)
G211262 NA non-coding downstream 57531 8091219 ~ 8103519 (-)
G211222 NA non-coding downstream 65467 8092030 ~ 8095583 (-)
G211353 NA non-coding downstream 129695 8031106 ~ 8031355 (-)
G211379 NA non-coding upstream 15406 8181064 ~ 8184356 (-)
G211402 NA non-coding upstream 59575 8225233 ~ 8227675 (-)
G211392 NA non-coding upstream 65566 8231224 ~ 8231943 (-)
G211381 NA non-coding upstream 69608 8235266 ~ 8235539 (-)
G211210 NA non-coding upstream 90626 8256284 ~ 8258074 (-)
G209491 NA other downstream 2132637 6028089 ~ 6028469 (-)
G207278 NA other downstream 6172283 1987011 ~ 1988767 (-)
G206938 NA other downstream 7333405 825859 ~ 827645 (-)
G206850 NA other downstream 7527855 632680 ~ 633195 (-)
G211175 NA other upstream 299635 8465293 ~ 8476265 (-)

Expression


Co-expression Network