XLOC_009549


Basic Information

Item Value
gene id XLOC_009549
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 46257545 ~ 46268918 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018853
TCACAGATACTGGTGTAGCTTTATTTTGTCGCTCATTTGATTTGACATTGACGTTAACGAGACTAAATTACCTGAAAGCTGCGGAGACTCCATTTACTTGCCGAGCAAAACAGACTGAATAAGACACGAAGGTGTTTTATACCTGCGGGACGGGGCAGGGCATAGCCTTCTTCCGCATACTCATGAATATAAATGCCTGAGTTCGGTCGTCTGATTGGATGGCAGCGGTTCAAACTCAACAGCTGAATAAACAAGCCGTTTTATTAATAAGTCCACAGGTTTGGATGGTGCAGGATTACTATAGCAACATCGACAGATAATGCTgacctaattaatattcatgattgCAATGTTTGTCATAAACACAAAATCCTGTTTACGCCTCATAAAACACTTTGAGGCTTTTGCTTTCTGTGCTTAAAGACTAAACGCAGTGATCGTGGCCTGTTTTTGTGATCACGGATGTAATGCAATCTTCAGACACGTCCTTCAGATGGAGGCGCTGTTGCTGCACTGCAGAATCTGGACGAGATGACCTTGATAAAGCAGAGTGTGAacgaggaggaggagaagaagaagaaacgaggaggagaagaagaaaaaggagagagagagagagagagagagagagagagagagagagagagagagagagagagagacatcgaTCCAGCAGAGCTTGTGTTTTAGTCAATGGAAACATGATTCTTCTCTTCCGCATAAACACCACACCCTGGAGAAGAGGAAGAGGAGAGATCCTGCATCACTACTGTAAACATCATCACTGTATATTCACTAATCAACATGAAGAACCATATCAAAATAGTGCATTAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018853 True 834 lncRNA 0.43 2 46257545 46268918

Neighbor

gene id symbol gene type direction distance location
XLOC_009548 NA coding downstream 43726 46210983 ~ 46213819 (-)
XLOC_009547 NA coding downstream 395824 45776193 ~ 45861721 (-)
XLOC_009546 CABZ01067232.1 coding downstream 583332 45668851 ~ 45674213 (-)
XLOC_009545 NA coding downstream 696689 45558167 ~ 45560856 (-)
XLOC_009544 MB21D2 coding downstream 718772 45527281 ~ 45538773 (-)
XLOC_009550 NA coding upstream 21354 46290272 ~ 46293726 (-)
XLOC_009551 NA coding upstream 61573 46330491 ~ 46331099 (-)
XLOC_009552 NA coding upstream 89332 46358250 ~ 46373939 (-)
XLOC_009553 NA coding upstream 103731 46372649 ~ 46378882 (-)
XLOC_009554 NA coding upstream 329881 46598799 ~ 46599661 (-)
XLOC_009542 NA non-coding downstream 850496 45365247 ~ 45407049 (-)
XLOC_009539 NA non-coding downstream 944506 45300527 ~ 45313039 (-)

Expression


Co-expression Network