XLOC_000955


Basic Information

Item Value
gene id XLOC_000955
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 4029769 ~ 4074148 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00002902
GCAGCACCATCACGTTTAACTGACCGGACCCGGCTTGATCTAGTTTCTGGAGTCTGTTCCGCACCAATTGAAGGAGTCTCCAGGGAAATCAGAGTTTGGAGCGGAGCATCATCAGGCCTGTTCCTCCAGCCGGACGCCCGACTGAAGAGCTGCGAGGACAGGACAGGTGTCTGATACTGAGACTGACACGCGCTACTGAGATTATAGTAACTGCATGGCATAAAGATAATTCCCCATATCTGCTGCGTTTCTACAGCATTGTCCATCAAACTGACACCTTCACACCCATACGGTGAGCGAGGAAGCTTATTTTACACTTAATCAGCTATTTGTTGGCACGTGTAATG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00002902 True 347 lncRNA 0.50 2 4029769 4074148

Neighbor

gene id symbol gene type direction distance location
XLOC_000954 NA coding downstream 182905 3844836 ~ 3846864 (-)
XLOC_000953 CABZ01113467.1 coding downstream 699334 3305549 ~ 3330435 (-)
XLOC_000952 NA coding downstream 729916 3296607 ~ 3299853 (-)
XLOC_000951 gpc5a coding downstream 734724 3100244 ~ 3295045 (-)
XLOC_000950 CU986306.1 coding downstream 1315494 2704604 ~ 2714275 (-)
XLOC_000956 NA coding upstream 10030 4084178 ~ 4250442 (-)
XLOC_000957 FP009765.2 coding upstream 136350 4210498 ~ 4210652 (-)
XLOC_000958 NA coding upstream 709637 4783785 ~ 4785460 (-)
XLOC_000959 FQ790365.1 coding upstream 1004223 5078371 ~ 5078488 (-)
XLOC_000960 NA coding upstream 1074445 5148593 ~ 5153828 (-)
XLOC_000949 NA non-coding downstream 1527025 2495021 ~ 2502744 (-)

Expression


Co-expression Network