Gene
RNA
| Item | Value |
|---|---|
| gene id | G207590 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000049 |
| NCBI id | null |
| chromosome length | 9665442 |
| location | 2751471 ~ 2751799 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU235558 | False | 329 | lncRNA | 0.49 | 1 | 2751471 | 2751799 |
| TU235556 | True | 234 | lncRNA | 0.47 | 1 | 2751566 | 2751799 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000049_02519296_02524006 | NA | coding | downstream | 227465 | 2519077 ~ 2524006 (-) |
| CI01000049_02331749_02338716 | NA | coding | downstream | 412748 | 2331296 ~ 2338723 (-) |
| CI01000049_02107910_02122886 | PNPLA4 | coding | downstream | 627185 | 2107736 ~ 2124286 (-) |
| CI01000049_01971492_01983341 | NA | coding | downstream | 767553 | 1971291 ~ 1984030 (-) |
| CI01000049_01956684_01959474 | NT5C2B, NT5C2, NT5C2A | coding | downstream | 791997 | 1956684 ~ 1959474 (-) |
| CI01000049_02876185_02882477 | NA | coding | upstream | 123629 | 2875428 ~ 2882856 (-) |
| CI01000049_03081339_03089363 | NA | coding | upstream | 329210 | 3081009 ~ 3089363 (-) |
| CI01000049_03093994_03098141 | NA | coding | upstream | 342038 | 3093837 ~ 3098141 (-) |
| CI01000049_03204366_03212170 | CREB1, CREB1B, CREB1A | coding | upstream | 452092 | 3203891 ~ 3212506 (-) |
| CI01000049_03256991_03257622 | CLDNG | coding | upstream | 505056 | 3256855 ~ 3257622 (-) |
| G207548 | NA | non-coding | downstream | 91759 | 2655915 ~ 2659712 (-) |
| G207504 | NA | non-coding | downstream | 240940 | 2510053 ~ 2510531 (-) |
| G207499 | NA | non-coding | downstream | 255540 | 2495731 ~ 2495931 (-) |
| G207493 | NA | non-coding | downstream | 264479 | 2486785 ~ 2486992 (-) |
| G207492 | NA | non-coding | downstream | 265020 | 2486187 ~ 2486451 (-) |
| G207655 | NA | non-coding | upstream | 294806 | 3046605 ~ 3046831 (-) |
| G207577 | NA | non-coding | upstream | 362360 | 3114159 ~ 3114981 (-) |
| G207669 | NA | non-coding | upstream | 453843 | 3205642 ~ 3223982 (-) |
| G207740 | NA | non-coding | upstream | 510536 | 3262335 ~ 3262612 (-) |
| G207742 | NA | non-coding | upstream | 514471 | 3266270 ~ 3266944 (-) |
| G207278 | NA | other | downstream | 762704 | 1987011 ~ 1988767 (-) |
| G206938 | NA | other | downstream | 1923826 | 825859 ~ 827645 (-) |
| G206850 | NA | other | downstream | 2118276 | 632680 ~ 633195 (-) |
| G206849 | NA | other | downstream | 2119895 | 631143 ~ 631576 (-) |
| G209491 | NA | other | upstream | 3276290 | 6028089 ~ 6028469 (-) |
| CI01000049_08056071_08059039 | TIMM10.S, TIMM10, TIMM10.L | other | upstream | 5303834 | 8055633 ~ 8059179 (-) |
| CI01000049_08452153_08453389 | CISD2 | other | upstream | 5699343 | 8451142 ~ 8454233 (-) |
| G211175 | NA | other | upstream | 5713494 | 8465293 ~ 8476265 (-) |
