G206457


Basic Information

Item Value
gene id G206457
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 2751548 ~ 2751799 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU234318
TGTTCTATCGAGTTGAGGTCAGGACTCTGTGCAGGCCAGTCAAGTTCCTCCACACCAAACTCACTCATCCATGTCTTTATGGACATTGCTTTGTGCACTGGTGCGCAGTCATGTTGGAACAGGAAGGGGCCATCCCCAAACTGTTCCCACAAAGTTGGGAGCATGAAATTGTCCAAAATGTCTTGGTATGCTGAAACATTAAGAGTTCCTTTCACTGGAACTAAGGGGCCAAACCCAACCCCTGAAAAACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234318 True 252 lncRNA 0.47 1 2751548 2751799

Neighbor

gene id symbol gene type direction distance location
CI01000049_02593696_02606225 NA coding upstream 145278 2593507 ~ 2606270 (+)
CI01000049_02345009_02446004 NLGN4A, NLGN4X, NLGN4 coding upstream 305544 2345009 ~ 2446004 (+)
CI01000049_02238067_02265765 PUDP, HDD1A coding upstream 485182 2237242 ~ 2266366 (+)
CI01000049_02226218_02227671 NA coding upstream 523814 2226218 ~ 2227734 (+)
CI01000049_02081249_02101569 STS coding upstream 649685 2081249 ~ 2101979 (+)
CI01000049_02827101_02828949 NA coding downstream 74031 2825830 ~ 2829760 (+)
CI01000049_02997869_03042673 PRKX coding downstream 245792 2997591 ~ 3042763 (+)
CI01000049_03064154_03077534 NA coding downstream 312355 3064154 ~ 3077997 (+)
CI01000049_03121188_03131739 NA coding downstream 369389 3121188 ~ 3131911 (+)
CI01000049_03133436_03158345 DHRSX coding downstream 381498 3133297 ~ 3158677 (+)
G206425 NA non-coding upstream 427064 2324226 ~ 2324484 (+)
G206405 NA non-coding upstream 443845 2307421 ~ 2307703 (+)
G206383 NA non-coding upstream 469990 2281281 ~ 2281558 (+)
G206353 NA non-coding upstream 481238 2270003 ~ 2270310 (+)
G206696 NA non-coding downstream 180681 2932480 ~ 2993106 (+)
G206707 NA non-coding downstream 219630 2971429 ~ 2991378 (+)
G206721 NA non-coding downstream 308643 3060442 ~ 3060730 (+)
G206723 NA non-coding downstream 310180 3061979 ~ 3062204 (+)
G206654 NA non-coding downstream 329181 3080980 ~ 3081443 (+)
CI01000049_01840330_01843844 FGF8B other upstream 907720 1839815 ~ 1844077 (+)
G207888 NA other downstream 872203 3624002 ~ 3624311 (+)
G208074 NA other downstream 1125597 3877396 ~ 3882211 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other downstream 1721726 4473662 ~ 4476270 (+)
G209660 NA other downstream 4126334 6878133 ~ 6882030 (+)
CI01000049_07219171_07224229 NA other downstream 4467049 7218811 ~ 7224268 (+)

Expression


Co-expression Network