G206721


Basic Information

Item Value
gene id G206721
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 3060442 ~ 3060730 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU234596
GTTTTGGCCTTGTCCCTTACGCACAGAGATTTCTCCAGTTTCTCTGGGTCTTTTGATGATGTTATGCACTGTAGATGATGAGATTTGCAAAGCCTTTGCAATTTGATGTTGAGGAACATTGTTTTTAAAGTATTCCACAATCTTTTTATGCACTCTTTCAAAGATTGGAGAGCCTCTGCCCATCTTTACTTCTGAGAGACTCTGCCTCTCTAAGACATCCCTTTTATAGCTAATCATGTTACAGACCTGATATCAATTAACCTAATTAGTTGCTAGATGTTCTCCCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234596 True 289 lncRNA 0.39 1 3060442 3060730

Neighbor

gene id symbol gene type direction distance location
CI01000049_02997869_03042673 PRKX coding upstream 17679 2997591 ~ 3042763 (+)
CI01000049_02827101_02828949 NA coding upstream 230682 2825830 ~ 2829760 (+)
CI01000049_02732074_02754633 NA coding upstream 305690 2731808 ~ 2754752 (+)
CI01000049_02593696_02606225 NA coding upstream 454172 2593507 ~ 2606270 (+)
CI01000049_02345009_02446004 NLGN4A, NLGN4X, NLGN4 coding upstream 614438 2345009 ~ 2446004 (+)
CI01000049_03064154_03077534 NA coding downstream 3424 3064154 ~ 3077997 (+)
CI01000049_03121188_03131739 NA coding downstream 60458 3121188 ~ 3131911 (+)
CI01000049_03133436_03158345 DHRSX coding downstream 72567 3133297 ~ 3158677 (+)
CI01000049_03214802_03219475 CHMP2B.L, CHMP2BA, CHMP2BB, CHM2B, CHMP2B, CHMP2B.S coding downstream 153794 3214524 ~ 3219586 (+)
CI01000049_03247914_03248937 NA coding downstream 187184 3247914 ~ 3249051 (+)
G206696 NA non-coding upstream 67336 2932480 ~ 2993106 (+)
G206707 NA non-coding upstream 69064 2971429 ~ 2991378 (+)
G206457 NA non-coding upstream 308643 2751548 ~ 2751799 (+)
G206425 NA non-coding upstream 735958 2324226 ~ 2324484 (+)
G206405 NA non-coding upstream 752739 2307421 ~ 2307703 (+)
G206723 NA non-coding downstream 1249 3061979 ~ 3062204 (+)
G206654 NA non-coding downstream 20250 3080980 ~ 3081443 (+)
G206656 NA non-coding downstream 23816 3084546 ~ 3086137 (+)
G206659 NA non-coding downstream 42905 3103635 ~ 3105339 (+)
G206658 NA non-coding downstream 243070 3303800 ~ 3304088 (+)
CI01000049_01840330_01843844 FGF8B other upstream 1216614 1839815 ~ 1844077 (+)
G207888 NA other downstream 563272 3624002 ~ 3624311 (+)
G208074 NA other downstream 816666 3877396 ~ 3882211 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other downstream 1412795 4473662 ~ 4476270 (+)
G209660 NA other downstream 3817403 6878133 ~ 6882030 (+)
CI01000049_07219171_07224229 NA other downstream 4158118 7218811 ~ 7224268 (+)

Expression


Co-expression Network