G207876


Basic Information

Item Value
gene id G207876
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 3591457 ~ 3591837 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU235877
GTAGTTTTTACAAAATAATTTTGGCAGCTGCGGTTGCCAGAATAATTTTGTAAAAAATACAAAAAAAAACTGTAAACACATTTACAGAACAAACTGTAAATTTTACAGTATAAAACTGTAATTTACAAACAAGAAATCTGAATGTAAACCAGTAAATTAAACAATGCACACTACTACTAAAATCTGTTTTGTAACTTTAACATATACTGACAACCACCATTATAATGCAGGTGGTAAAAGAGAAAGCCACATGAAGAATCAGAGTTCATCACAAGTAGCTTTTCCACGAGCTGAAGTATATACTAATGTAAAGAGGGTGCAAAGAGTCATTCACGCAAACGCAAAACACCATCATGGTAACCCACAACACTTAAGTAATGC

Function

NR:

description
GRP94a protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235877 True 381 lncRNA 0.32 1 3591457 3591837

Neighbor

gene id symbol gene type direction distance location
CI01000049_03584412_03585910 ARL6 coding upstream 5358 3582032 ~ 3586099 (+)
CI01000049_03475307_03572415 EPHA6 coding upstream 19042 3475307 ~ 3572415 (+)
CI01000049_03292042_03304890 NA coding upstream 286356 3292042 ~ 3305101 (+)
CI01000049_03279568_03285640 ARL13B coding upstream 305272 3279568 ~ 3286185 (+)
CI01000049_03259617_03273490 NA coding upstream 316866 3259174 ~ 3274591 (+)
CI01000049_03593799_03605097 SLC5A7 coding downstream 1890 3593727 ~ 3606491 (+)
CI01000049_03631096_03632219 KCTD12.2 coding downstream 37540 3629377 ~ 3632370 (+)
CI01000049_03756695_03758838 KLF12 coding downstream 164586 3756423 ~ 3759295 (+)
CI01000049_03843068_03843461 NA coding downstream 251015 3842852 ~ 3843545 (+)
CI01000049_03844455_03850424 GPALPP1 coding downstream 252618 3844455 ~ 3850430 (+)
G206829 NA non-coding upstream 220119 3371097 ~ 3371338 (+)
G206828 NA non-coding upstream 222060 3369113 ~ 3369397 (+)
G206827 NA non-coding upstream 222938 3368308 ~ 3368519 (+)
G206824 NA non-coding upstream 228410 3362789 ~ 3363047 (+)
G206823 NA non-coding upstream 229923 3361069 ~ 3361534 (+)
G207889 NA non-coding downstream 36112 3627949 ~ 3628174 (+)
G207989 NA non-coding downstream 49415 3641252 ~ 3641553 (+)
G207995 NA non-coding downstream 69044 3660881 ~ 3866543 (+)
G208019 NA non-coding downstream 118914 3710751 ~ 3711934 (+)
G208071 NA non-coding downstream 307872 3899709 ~ 3901473 (+)
CI01000049_01840330_01843844 FGF8B other upstream 1747629 1839815 ~ 1844077 (+)
G207888 NA other downstream 32165 3624002 ~ 3624311 (+)
G208074 NA other downstream 285559 3877396 ~ 3882211 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other downstream 881688 4473662 ~ 4476270 (+)
G209660 NA other downstream 3286296 6878133 ~ 6882030 (+)
CI01000049_07219171_07224229 NA other downstream 3627011 7218811 ~ 7224268 (+)

Expression


Co-expression Network