Gene
RNA
| Item | Value |
|---|---|
| gene id | G208071 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000049 |
| NCBI id | null |
| chromosome length | 9665442 |
| location | 3899709 ~ 3901473 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU236098 | True | 1765 | lncRNA | 0.33 | 1 | 3899709 | 3901473 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000049_03893675_03894085 | NA | coding | upstream | 4540 | 3892179 ~ 3895169 (+) |
| CI01000049_03872066_03885573 | NA | coding | upstream | 13469 | 3872066 ~ 3886240 (+) |
| CI01000049_03852103_03860363 | GTF2F2A | coding | upstream | 38935 | 3852103 ~ 3860774 (+) |
| CI01000049_03844455_03850424 | GPALPP1 | coding | upstream | 49279 | 3844455 ~ 3850430 (+) |
| CI01000049_03843068_03843461 | NA | coding | upstream | 56164 | 3842852 ~ 3843545 (+) |
| CI01000049_03951470_03952048 | NA | coding | downstream | 49849 | 3951322 ~ 3952173 (+) |
| CI01000049_03961350_03962120 | NA | coding | downstream | 59806 | 3961279 ~ 3962949 (+) |
| CI01000049_03972425_03973129 | NA | coding | downstream | 70773 | 3972246 ~ 3973847 (+) |
| CI01000049_04000506_04009508 | USP38 | coding | downstream | 98628 | 4000101 ~ 4009726 (+) |
| CI01000049_04064603_04090446 | GAB1 | coding | downstream | 163130 | 4064603 ~ 4090446 (+) |
| G207995 | NA | non-coding | upstream | 33166 | 3660881 ~ 3866543 (+) |
| G208019 | NA | non-coding | upstream | 187775 | 3710751 ~ 3711934 (+) |
| G207989 | NA | non-coding | upstream | 258156 | 3641252 ~ 3641553 (+) |
| G207889 | NA | non-coding | upstream | 271535 | 3627949 ~ 3628174 (+) |
| G207876 | NA | non-coding | upstream | 307872 | 3591457 ~ 3591837 (+) |
| G208090 | NA | non-coding | downstream | 20953 | 3922426 ~ 3922879 (+) |
| G208095 | NA | non-coding | downstream | 30891 | 3932364 ~ 3932589 (+) |
| G208096 | NA | non-coding | downstream | 31799 | 3933272 ~ 3933626 (+) |
| G208098 | NA | non-coding | downstream | 38587 | 3940060 ~ 3940304 (+) |
| G208110 | NA | non-coding | downstream | 247108 | 4148581 ~ 4151769 (+) |
| G208074 | NA | other | upstream | 17498 | 3877396 ~ 3882211 (+) |
| G207888 | NA | other | upstream | 275398 | 3624002 ~ 3624311 (+) |
| CI01000049_01840330_01843844 | FGF8B | other | upstream | 2055881 | 1839815 ~ 1844077 (+) |
| CI01000049_04473766_04475768 | GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 | other | downstream | 572052 | 4473662 ~ 4476270 (+) |
| G209660 | NA | other | downstream | 2976660 | 6878133 ~ 6882030 (+) |
| CI01000049_07219171_07224229 | NA | other | downstream | 3317375 | 7218811 ~ 7224268 (+) |
| G210091 | NA | other | downstream | 3972277 | 7873750 ~ 7878856 (+) |
| CI01000049_08326623_08329601 | NA | other | downstream | 4426479 | 8326285 ~ 8329915 (+) |
