G208090


Basic Information

Item Value
gene id G208090
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 3922426 ~ 3922879 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU236118
TTCCTCTCTCACTACCCTCGATGGTGGGGTGGCAGTGCTACGGGCACACCACCTCTGCCCTGCATGTGTCTTGGCCCCCGGCAAGTCTGTGGAAGGCCAAAGCACTCATTGCAAATGGGTAGTTCTAAGTCGGGGTTGAGCTACGCATGATGCAAGTCGTACTGCAGGCCCCTGGCCAGACGATGTCCACCATGGTGGTCCAGAAACACCCCTGGCTAGCCTTACAGAGGTGTGAGTTGTCGTCAAAATGCGCTTTCTCGATGATCTCATCTCACAAGCTGGCCTAAAACCCAGCCCGCTCAGTCCGCAGCCAAGCCAGTTGGTTAGTGAGAAGCGGTCCTGAAACGGGCGACCTGGAGCAGAGGTAGACAGTTCTTCGGGAGACCGAGGAGGAGGGCCGAGTGGAGAATTTTTGGTTCCGTTCTGTTCCACCGCTGGCTCTCCGGAGTCCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU236118 True 454 lncRNA 0.57 1 3922426 3922879

Neighbor

gene id symbol gene type direction distance location
CI01000049_03893675_03894085 NA coding upstream 27257 3892179 ~ 3895169 (+)
CI01000049_03872066_03885573 NA coding upstream 36186 3872066 ~ 3886240 (+)
CI01000049_03852103_03860363 GTF2F2A coding upstream 61652 3852103 ~ 3860774 (+)
CI01000049_03844455_03850424 GPALPP1 coding upstream 71996 3844455 ~ 3850430 (+)
CI01000049_03843068_03843461 NA coding upstream 78881 3842852 ~ 3843545 (+)
CI01000049_03951470_03952048 NA coding downstream 28443 3951322 ~ 3952173 (+)
CI01000049_03961350_03962120 NA coding downstream 38400 3961279 ~ 3962949 (+)
CI01000049_03972425_03973129 NA coding downstream 49367 3972246 ~ 3973847 (+)
CI01000049_04000506_04009508 USP38 coding downstream 77222 4000101 ~ 4009726 (+)
CI01000049_04064603_04090446 GAB1 coding downstream 141724 4064603 ~ 4090446 (+)
G208071 NA non-coding upstream 20953 3899709 ~ 3901473 (+)
G207995 NA non-coding upstream 55883 3660881 ~ 3866543 (+)
G208019 NA non-coding upstream 210492 3710751 ~ 3711934 (+)
G207989 NA non-coding upstream 280873 3641252 ~ 3641553 (+)
G207889 NA non-coding upstream 294252 3627949 ~ 3628174 (+)
G208095 NA non-coding downstream 9485 3932364 ~ 3932589 (+)
G208096 NA non-coding downstream 10393 3933272 ~ 3933626 (+)
G208098 NA non-coding downstream 17181 3940060 ~ 3940304 (+)
G208110 NA non-coding downstream 225702 4148581 ~ 4151769 (+)
G208130 NA non-coding downstream 244205 4167084 ~ 4167339 (+)
G208074 NA other upstream 40215 3877396 ~ 3882211 (+)
G207888 NA other upstream 298115 3624002 ~ 3624311 (+)
CI01000049_01840330_01843844 FGF8B other upstream 2078598 1839815 ~ 1844077 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other downstream 550646 4473662 ~ 4476270 (+)
G209660 NA other downstream 2955254 6878133 ~ 6882030 (+)
CI01000049_07219171_07224229 NA other downstream 3295969 7218811 ~ 7224268 (+)
G210091 NA other downstream 3950871 7873750 ~ 7878856 (+)
CI01000049_08326623_08329601 NA other downstream 4405073 8326285 ~ 8329915 (+)

Expression


Co-expression Network