Gene
RNA
| Item | Value |
|---|---|
| gene id | G209491 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000049 |
| NCBI id | null |
| chromosome length | 9665442 |
| location | 6028089 ~ 6028469 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU237643 | False | 325 | TUCP | 0.49 | 1 | 6028089 | 6028413 |
| TU237652 | True | 236 | lncRNA | 0.47 | 1 | 6028234 | 6028469 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000049_05926968_05969885 | VEGFC | coding | downstream | 58112 | 5926683 ~ 5970122 (-) |
| CI01000049_05901108_05909136 | ASB5B, ASB5 | coding | downstream | 119049 | 5900660 ~ 5909185 (-) |
| CI01000049_05807016_05816424 | GPM6AA, DMB, GPM6A, GPM6AB | coding | downstream | 211810 | 5806494 ~ 5816424 (-) |
| CI01000049_05664017_05705638 | GLRA3 | coding | downstream | 322596 | 5663752 ~ 5705638 (-) |
| CI01000049_05649195_05660180 | HPGD | coding | downstream | 367143 | 5649051 ~ 5661091 (-) |
| CI01000049_06427734_06436267 | NA | coding | upstream | 399112 | 6427581 ~ 6436985 (-) |
| CI01000049_06621205_06636088 | NA | coding | upstream | 592720 | 6621189 ~ 6636088 (-) |
| CI01000049_06650349_06653460 | TMEM134 | coding | upstream | 621774 | 6650243 ~ 6653793 (-) |
| CI01000049_06665198_06670691 | STOX2A, STOX2 | coding | upstream | 636532 | 6665001 ~ 6671560 (-) |
| CI01000049_06700427_06705942 | NA | coding | upstream | 671450 | 6699919 ~ 6705988 (-) |
| G209465 | NA | non-coding | downstream | 116758 | 5910418 ~ 5911476 (-) |
| G209455 | NA | non-coding | downstream | 140783 | 5886407 ~ 5887451 (-) |
| G209452 | NA | non-coding | downstream | 143127 | 5881416 ~ 5885107 (-) |
| G209238 | NA | non-coding | downstream | 380711 | 5645999 ~ 5647523 (-) |
| G209241 | NA | non-coding | downstream | 382513 | 5645321 ~ 5645721 (-) |
| G209503 | NA | non-coding | upstream | 36317 | 6064786 ~ 6065046 (-) |
| G209508 | NA | non-coding | upstream | 47037 | 6075506 ~ 6076086 (-) |
| G210739 | NA | non-coding | upstream | 217801 | 6246270 ~ 6246498 (-) |
| G210742 | NA | non-coding | upstream | 221666 | 6250135 ~ 6250338 (-) |
| G210749 | NA | non-coding | upstream | 246306 | 6274775 ~ 6275298 (-) |
| G207278 | NA | other | downstream | 4039467 | 1987011 ~ 1988767 (-) |
| G206938 | NA | other | downstream | 5200589 | 825859 ~ 827645 (-) |
| G206850 | NA | other | downstream | 5395039 | 632680 ~ 633195 (-) |
| G206849 | NA | other | downstream | 5396658 | 631143 ~ 631576 (-) |
| CI01000049_08056071_08059039 | TIMM10.S, TIMM10, TIMM10.L | other | upstream | 2027164 | 8055633 ~ 8059179 (-) |
| CI01000049_08452153_08453389 | CISD2 | other | upstream | 2422673 | 8451142 ~ 8454233 (-) |
| G211175 | NA | other | upstream | 2436824 | 8465293 ~ 8476265 (-) |
