XLOC_009594


Basic Information

Item Value
gene id XLOC_009594
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 127435 ~ 129026 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021857
GACGGCACATCTCCAGGATCAGGCTTGGTCACCGCTGCTTTAGGCATGCATCTGCTGCTTGTAAACAAGAGGCGGACGATGCTGCCCTCATGCTGGAGTCGCTGGAACTGCATCCAGTATAGCTCTGCAGCTCCGACACAGACACACCACTGACCCTGCTTCCTGCATTTGTGAATAAGACAAAGGAAAACACTCCGCTCAGCCCGTCTGAAGCATCAGAAACCCTCTCTGAGACTGCGCAAGTGTGTTTCCGTGTGTTTTACTCTTGATTTAGTCCATTTTAGTCTCATGTCTAGTTCAGCTTCTGTATGTCTACTggagccaaacacacacacacacacacacacacacacacacacacacacacagaggctgCGCGCCGGCACTTTCAGCACAGATCCGCCTCAGTCTGCGCTGGAGATCCGCTCTTCTCCACTCATGAGCTCATCCTCTGTGATCGCGAGCGATGGACCGCATCCTTCTGGAGGGATTTTAATCTGATGATGCTGATTTGGGTCGCTTCGGGACGTTGCGGTCATGGACAGGGAGACACATACATGTAGATCAGAACTTGCTCTGGACGTTCGTCTGTTCTGATGTGATCAACATTTGAAGATGTGTCTGAGCTGCGCAGTGAGGTTTTCAGGATGAGCATGCGGATGAATCGCAGAGAAAAGCGGAGGAAAGAGTGCAGATGCATTCCTCCCATCACTACACCGGCTTTCCACAACTTCTGTGCATCAGCGTTCAGATCTGTGTCCACATCTCTGCTGTTTGCACCAGGCGGTGTGTGACAGATGTGCAACATTAATGGAAAATAAGCTAGTCTTTCCAGGACATCTTAAAAACCAGTCGACAAGAAGACAAGCGGAAGTTCTGATGATCAGAGCAAACACACTGTCCTGCGGAGCACTGCTGCTTATTTGCATAGTTTTAATTAAAGGACTGGTGTGAACCTGCTAACATGCAGTTGTGGTCAGGATATCTGTGCTGAACAGCTTCTGTCTGATACTGCAGGTCGGATGTGAATTTTAGGATGTGCACATTACTGACGGCTTATATGACTTCAGCTGAACAACACTGTCAACACAGAGTCTGAGCTTATTCTCTGTGATTtgataaataat

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021857 True 1127 lncRNA 0.49 2 127435 129026

Neighbor

gene id symbol gene type direction distance location
XLOC_009593 NA coding upstream 5394 121024 ~ 122041 (+)
XLOC_009592 sox4b coding upstream 56327 68069 ~ 71108 (+)
XLOC_009591 cdkal1 coding upstream 74299 39498 ~ 53136 (+)
XLOC_009590 CABZ01090785.1 coding upstream 123190 1471 ~ 4245 (+)
XLOC_009595 si:ch211-201o1.1 coding downstream 23156 152182 ~ 168150 (+)
XLOC_009596 NA coding downstream 57548 186574 ~ 190975 (+)
XLOC_009597 nrsn1 coding downstream 92713 221739 ~ 229482 (+)
XLOC_009598 LO017841.1 coding downstream 291096 420122 ~ 513158 (+)
XLOC_009599 NA coding downstream 303944 432970 ~ 457475 (+)
XLOC_009600 NA non-coding downstream 487187 616213 ~ 642909 (+)
XLOC_009602 NA non-coding downstream 903549 1032575 ~ 1035953 (+)

Expression


Co-expression Network