XLOC_009600


Basic Information

Item Value
gene id XLOC_009600
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 616213 ~ 642909 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021671
gctgattaaataaataaaataccagcGCTGGTTTACTCTATAAGCATGCAGTGATTTCACTGTCATGGTTTAAACCTGTGCATATTTTAATGTCATTCTCAGAGCTTGAAGACATCAGACATCATCTAAATGCAGAACGGAGACTCCTGTGGTGTTAAAGCAGGATCTTATATAAAGATGTACGCCAATGCTTATGTTACGCATGTGTCCACTACTGGTGGAGCATCTGAATGGGTTTGAATGGAGTGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021671 True 249 lncRNA 0.40 2 616213 642909

Neighbor

gene id symbol gene type direction distance location
XLOC_009598 LO017841.1 coding upstream 103055 420122 ~ 513158 (+)
XLOC_009599 NA coding upstream 158738 432970 ~ 457475 (+)
XLOC_009597 nrsn1 coding upstream 386731 221739 ~ 229482 (+)
XLOC_009596 NA coding upstream 425238 186574 ~ 190975 (+)
XLOC_009595 si:ch211-201o1.1 coding upstream 448063 152182 ~ 168150 (+)
XLOC_009601 irx1a coding downstream 170871 813780 ~ 817937 (+)
XLOC_009602 NA coding downstream 389666 1032575 ~ 1035953 (+)
XLOC_009603 adamts16 coding downstream 457650 1100559 ~ 1176503 (+)
XLOC_009604 rprd2b coding downstream 556293 1199202 ~ 1211162 (+)
XLOC_009605 LO017852.3 coding downstream 569765 1212674 ~ 1212788 (+)
XLOC_009594 NA non-coding upstream 487187 127435 ~ 129026 (+)
XLOC_009593 NA non-coding upstream 494172 121024 ~ 122041 (+)
XLOC_009606 LO017852.2 non-coding downstream 577537 1220446 ~ 1220562 (+)
XLOC_009611 NA non-coding downstream 1077850 1720759 ~ 1721414 (+)
XLOC_009612 CABZ01085979.1 non-coding downstream 1098028 1740937 ~ 1741058 (+)

Expression


Co-expression Network