XLOC_009602


Basic Information

Item Value
gene id XLOC_009602
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 1032575 ~ 1035953 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021860
ttaatcagatgatgtcattacgctgctgtgccgtcagccaatcgttgcattgctgatcatgatttcgaggatcgatagatctgtccttcataacacacgcagcgatctcagatcagttcatccagacattctaatctgattcgcgaacttgtttgaagaaccaaattagcgagagatcagttatcaagattaaaagatccgggatctgccaaataatcttagatcatttaagcgaggtacgaagaacggacccctggtggcCATTTTTAAAGGTGTTGGGCCCGAGACGTGCTCAAGCTGTAACTAGTAAACTAATGGCATGCTTTACCTAGAGTTATTTCTGAAATACTAAAGACCTTTCCCTGCACATGGATTGGAGGGTAACCTGTTTTTGAAGCCTGTTTCCTGTGGAGTTTGGATTACCTGTTGCTCTGCTGCTGCATGATGTTTACAAACCAGAACCTCAGAGAAGAGACTGTGGGATACCCCAAACTTCTATTTACCCCCAAGCAAAGAACAAAACGGAGATTTGCTGTGATGATATCCAGATTGGGGGGGTTGCGTTAAAGAAAGCAATCCCATTCGAAATGGTCAAGGTAATTGCTCCTAACACTGAAACACTCCACTCCACAAAGGCCCACAAGGACAGACATTGTCATGCAGAAAACTAGCCTTCGGAGACAATTGATTTGGCCCATATCATGGC

Function

GO:

id name namespace
GO:0090342 regulation of cell aging biological_process
GO:0090344 negative regulation of cell aging biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021860 True 706 lncRNA 0.44 2 1032575 1035953

Neighbor

gene id symbol gene type direction distance location
XLOC_009601 irx1a coding upstream 214638 813780 ~ 817937 (+)
XLOC_009600 NA coding upstream 389666 616213 ~ 642909 (+)
XLOC_009598 LO017841.1 coding upstream 519417 420122 ~ 513158 (+)
XLOC_009599 NA coding upstream 575100 432970 ~ 457475 (+)
XLOC_009597 nrsn1 coding upstream 803093 221739 ~ 229482 (+)
XLOC_009603 adamts16 coding downstream 64606 1100559 ~ 1176503 (+)
XLOC_009604 rprd2b coding downstream 163249 1199202 ~ 1211162 (+)
XLOC_009605 LO017852.3 coding downstream 176721 1212674 ~ 1212788 (+)
XLOC_009606 LO017852.2 coding downstream 184493 1220446 ~ 1220562 (+)
XLOC_009607 LO017852.1 coding downstream 192120 1228073 ~ 1239617 (+)
XLOC_009596 NA non-coding upstream 841600 186574 ~ 190975 (+)
XLOC_009594 NA non-coding upstream 903549 127435 ~ 129026 (+)
XLOC_009611 NA non-coding downstream 684806 1720759 ~ 1721414 (+)
XLOC_009612 CABZ01085979.1 non-coding downstream 704984 1740937 ~ 1741058 (+)
XLOC_009613 NA non-coding downstream 740562 1776515 ~ 2105556 (+)

Expression


Co-expression Network