XLOC_009608 (LO018340.1)


Basic Information

Item Value
gene id XLOC_009608
gene name LO018340.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 1254390 ~ 1321591 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019301
AATCAATTCATAATTGTATTAATTGTGTTATGCAATCtgcaatgctttggcaatacttgaCAGGTCATGCCAATTAAGAATTGACCTGAGAGAGTAAGTGTGTGTATAGTTGTACTGGTTTTGATGGTTTGCAAGGACAAAAATACTCTGTATCAAATGTTTATGAGGCCATGTcttgtgtcctcgtaattcaGTATGCTTAAAAATCAATCTTAATGGGCTCTTATAGCATTTAAATGTGCAACTGATTCCCTGTGAGGCATTGGTTTTGGGGTAGGGCctcataatgtgtgtgtttttacagaataaaagACATTACAGCTGTGGGAGTCCTCAGAAATCACCAATACCAACATGTGTCAGTGTGTGCGCGAGTGTACCTTGCATTCCTGACATTGTGGAGATGAattgtccccacaagtatagcaacaccagtacattttaaatttgtgggAACGTTATTTGGCATAAACAGCTCATAAATCAGACTTTATGAAGTGTTTTGAAcgtgtaaaaatgcagattgtttgtTGTGAGGGTTGAGTTTTAGGGTAGAGAGACGGAATATACAGTGGAAACAACATTACACAAATGGGAATCCCCATAAAggtagctgtacaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcccctgCAGGGCCCCGATCTGTCCAGCGTCACACAAGGACAAAAAAAAGTTGTCAGGCGAAGGACAGAGAAAAAAAAGCCCTCAGTCACCCCTCCTTCtctcagccgtgtgtgtgtgtgtgtgtgtgtcgcacaGAGCAGAGTCAGTCTGGAGGATCCCGCAGAGTCTCCGCGCGGCTCCGGTTTGTTTCTGCGCTTTTCGGTCAACTTTCCGCGGCTCGGATCTGCAGTTTCCCCGAGGAGCACAGCATGAGGAGCGGCTCGCAGAGCAGATTGTGTGTGTTCTGGTGTTGTGTGTTGGCCGTCCTGCCTTTAACAACAGCGGATGAAGCAGAGAAACCGGCAGCAGGACGGCAGTCTCGCCAGGCGGAGGAGGTGGGGCTTGAAGGTGTCTGGGCTCCATGGAGCGAGTGGGTGGAGTGTTCCCAGAGCTGTGGAGTGGGCGTGGCCGAGAGGCGGAGACAGTGTATGCCGCCACCACAAACTCCACCCCTTACATGGAATAGACCATCTTACCTTCCGCCAGGTGTCCCGAACAACACCCCGGTGATCTCTGCAGTCAGACCCTTCTACAATAACCTGTATCCTCCTAATGAACCATATGGAGCTGAGAGACCTTTTCCCCCAGCTCtcccagccaatcagaatccaggaTTACCACTGTACCGTAATGAAGGCGGGCAGTTTGGCTCATCCGGTCAGGAGCCGGTTTCAGTTTACCGTTCGCCATCCTCGTCTTCTTCACTGCCATATAGCAGAGTTCCAGCACGGACACCGAGTCATGGAAGAGGTGGAGCTATTGGTAGCAGGAGGGCAGTTTCCACCAATAGGGATCCTGCGTCTGTCAGAAGGTCTAGTTCGTCCATTCGTCCTGGACAGTTTGGATATGGCAGGGTGCCGTTTTCTCTTCCTCTACACAGACAAAACCGACATGCGCGCCACACACACCACAACACCAGCACAGATAGTCTGGACGCTCTGAATGTGAACTCCAGCTCACATGGGGAAAAAACACACGAAAAAACTCCTGCAGACAAAGTGAGTGAGGACAATGATGATGGAGAGCAGCGCAGACGAGTGAGAATCCCTCATATAAGGCCCCCGGCACAGAGAAACGGGGCCCGGGATAGACGCATCGAAGGCCGCACGTCCCGCCAGGCTCCTCCATCATACACACGCACCATCAGCAGAACACACACTTCCAGAGATCCTCCTCCATACGGCCCCCAAACGCCCTCAAATCCCAACCCAGAGCCCTGGGCCCCTGTGCAGACCCCTGGAAATGAGCAGGACTGGAGGCCTCCAGTGGCAGGAAACTACAGATGCTCAGGCAGAGACAGAGAATACCGCAGGTGCAGTCTACAGGCGTGTCCAGGTGCTGCAGTAAACTCCAGGGCTGATCAGTGCTCCGCCTTCAACGCTCAGGAGTTCATGGGTCGTGTGTACGACTGGGAGCCCTTCACTGAAGTGGGTCTGGAGCAGCAGTGTGAGTTAACCTGTCGGCCGGTCGGTTACCGTTTCTACGTGCGCCAGGCGGAGAGGGTTCGAGATGGGACACCCTGCGCAAACAACACACCCACtgatgtgtgtgtgggggggcgCTGCCTgagcgaGGGTTGTGACGGTGTGCTGGGCTCCGGGCTGGTCCGGGACCGCTGTGGTGTGTGTGGCGGTGAGGACGGCACCTGTGAACGGGTCAGCGGGAGCTTCATGAACACCAGTGTTCCTCTGGGATACCACAAAATCCTGGACATTCCACCCGGAGCCACGGCTATCAACATCACGGAGAGACGGGCCAGCCCAAACTACCTGGctctgCGCAGTGGGACAGGTCAGTCAGTGGTGAACGGCCGCTGGGCTGTGGATCCTCCAGGAGAGTATCAGGCAGGAGGAGCCGCTTTCCTCTACACCCGACCCAAAGCGGAGCCTCAGGAGCCGGGAGAGGACAGAGGAGAGACCCTCACTGCTGCTGGACCCACTACTGCACTGCTGCAGCTATACATTATTTTCCACAGGCAGAATCCAGGCATCGACTATGAATATTACATCCCAGTGGATAAACggagagacggagagagagaagtgctcagagagagagagagagggagatcgGCACTCAGAGAGACCACTGGAGTCTCGATGGCAGTGGAAAACCCTGTTGCTCCTCCTCCAGTGTCGTCTTCCTtcccttcatcatcatcatcatcttcgtcTTCATCTGATCGATGGCCACCTGAGAGGCCCCGCCCACAGGGCTTAGGACCCAATCGAAATGCTCGGATCCCTCCAAGAACAGACCTCCCATTGGACAAtctgcctgtgtttgtgtggagaCGAGGAGCGCTGACAGAATGCACTGCTACCTGTGGAAAAGGCTCTCAGTacagagagattgtgtgtgtgaacagaCACACAGAACAGGAGGTTCACGAGAGGAGGTGTGACTCTGCAACCAAACCCACGCCAGAGGAGGAACCATGTAATGTTCATCCATGTCCACCATTctgggATATGGGGGCGTGGTCAGAGTGCAGTGTTTCCTGTGGTTGGGGTGTTCAGCAGCGTCAGATACAGTGCAGGCAGAGCTTTGGGAACCGCTCAACGATGGTCCACCCTCAGCGCTGCGCTGGTCTTAGCCGTCCCAACGCCACACAGCCCTGCCACCCGCGCGTCTGTTCACACTGGGAGATCAGCACCAACTGGAGCACGTGTTCGGTGGATTGTGGAATGGGAAAGAGAACCAGGAATGTGCGTTGTGTCAGTAACCACGGCAACACTGTGAATGACCGGGAGTGCAATGACAGGCTCCGCCCACAGCACAGCGAGGACTGTCACATGGGTCCGTGCGTCACCAACTGGTACTTCACTGATTGGACACACACTTGTTCTGCGGAGTGCGGGCCGGGTGTGCAGCGCAGGGAGGTGGTGTGTGTGAGCGCTGGAGGCCGGAGAGAAGGAGACGGAGGACTGGAGTGTGTCGGGGACAAACCTGCAGACATGAAGGCCTGTAACGGTGGCCCCTGTACAGCCACATACCTGTGGTACACCGGGCCCTGGGGATACTGTAACGCAGTGTGTGGAAACGGAACTCAGCGCAGAGACGTCATCTGTGTGAGGAAGAGCGGCAGTGAGTTTACGGTCAGCAGCTCCAGCGACTGCTCTCACCTGGAGAAACCCTCACCTGTGCAGCCCTGTGAGCTGCAGCCCTGCACACCACAGTGGTTCACCACCGACTGGAGCACGTGCTCTCGCTCCTGTGGTGAAGGGCTCCAGACGCGAGAGGTGCGCTGCCTCACACCTGACAAGCAGCACAGCGCCACCTGCCATCCAGACGCCAGACCTGCACACCAGCAGCCCTGCAACACCATTCCCTGCAGTCCCTTCGAAgATGAGAACTGTAAAGACAGACGGCATAACTGTGTAATGGTGGTTCAGGCTCGGCTCTGCGTCTACTCCTATTACAAGACGGCCTGCTGCGCCTCCTGTACCCAAAGTGCTCAGCGGGCCAAAAGACATTAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000063407

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019301 True 4207 mRNA 0.54 17 1254390 1321591

Neighbor

gene id symbol gene type direction distance location
XLOC_009607 LO017852.1 coding upstream 14773 1228073 ~ 1239617 (+)
XLOC_009606 LO017852.2 coding upstream 33828 1220446 ~ 1220562 (+)
XLOC_009605 LO017852.3 coding upstream 41602 1212674 ~ 1212788 (+)
XLOC_009604 rprd2b coding upstream 43228 1199202 ~ 1211162 (+)
XLOC_009603 adamts16 coding upstream 77887 1100559 ~ 1176503 (+)
XLOC_009609 celf3b coding downstream 12840 1334431 ~ 1359903 (+)
XLOC_009610 cers2b coding downstream 40659 1362250 ~ 1399328 (+)
XLOC_009611 NA coding downstream 399168 1720759 ~ 1721414 (+)
XLOC_009612 CABZ01085979.1 coding downstream 419346 1740937 ~ 1741058 (+)
XLOC_009613 NA coding downstream 454924 1776515 ~ 2105556 (+)
XLOC_009602 NA non-coding upstream 218437 1032575 ~ 1035953 (+)
XLOC_009600 NA non-coding upstream 611481 616213 ~ 642909 (+)
XLOC_009599 NA non-coding upstream 796915 432970 ~ 457475 (+)
XLOC_009614 NA non-coding downstream 538793 1860384 ~ 1861160 (+)
XLOC_009615 NA non-coding downstream 800080 2121671 ~ 2176051 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location