XLOC_009611


Basic Information

Item Value
gene id XLOC_009611
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 1720759 ~ 1721414 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021862
CACCTCTGCAGTCTCAGCTCCATGGGGTCAAAATGAAACGCACTTTCAGAGGATTCCCCATCATCTCCTCGTCTCTCGCGCTTTCTCTCCTTCTTCTCCTCTTTTCTGTAGATCTTCATCATCTGTTTCTCCTGCTCAGACTGGATGGTCACCTGACAGCCGTATGTGGGCATGTTGGATTCATCTCGCAGACCTTTAGGCTTTCCTgatgtttag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021862 True 216 lncRNA 0.49 2 1720759 1721414

Neighbor

gene id symbol gene type direction distance location
XLOC_009610 cers2b coding upstream 321431 1362250 ~ 1399328 (+)
XLOC_009609 celf3b coding upstream 360856 1334431 ~ 1359903 (+)
XLOC_009608 LO018340.1 coding upstream 399168 1254390 ~ 1321591 (+)
XLOC_009607 LO017852.1 coding upstream 481142 1228073 ~ 1239617 (+)
XLOC_009606 LO017852.2 coding upstream 500197 1220446 ~ 1220562 (+)
XLOC_009612 CABZ01085979.1 coding downstream 19523 1740937 ~ 1741058 (+)
XLOC_009613 NA coding downstream 55101 1776515 ~ 2105556 (+)
XLOC_009614 NA coding downstream 138970 1860384 ~ 1861160 (+)
XLOC_009615 NA coding downstream 400257 2121671 ~ 2176051 (+)
XLOC_009616 LO017875.1 coding downstream 562642 2284056 ~ 2284174 (+)
XLOC_009605 LO017852.3 non-coding upstream 507971 1212674 ~ 1212788 (+)
XLOC_009602 NA non-coding upstream 684806 1032575 ~ 1035953 (+)
XLOC_009600 NA non-coding upstream 1077850 616213 ~ 642909 (+)
XLOC_009599 NA non-coding upstream 1263284 432970 ~ 457475 (+)
XLOC_009598 LO017841.1 non-coding upstream 1207601 420122 ~ 513158 (+)

Expression


Co-expression Network