XLOC_009620 (CU896588.1)


Basic Information

Item Value
gene id XLOC_009620
gene name CU896588.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 2729373 ~ 2729489 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019314
TGCCACAGCtgtatcaccctgcagcccaagaccggttactcactgaagataagcagggctgagcctggtcagtatctggatgggatcccacatgggaaagctaggttgctgttggat

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000108884

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019314 True 117 rRNA 0.54 1 2729373 2729489

Neighbor

gene id symbol gene type direction distance location
XLOC_009619 preb coding upstream 146095 2565433 ~ 2583278 (+)
XLOC_009618 cnih4 coding upstream 256796 2469889 ~ 2472577 (+)
XLOC_009617 CU928063.1 coding upstream 294911 2433696 ~ 2434462 (+)
XLOC_009616 LO017875.1 coding upstream 445199 2284056 ~ 2284174 (+)
XLOC_009615 NA coding upstream 553322 2121671 ~ 2176051 (+)
XLOC_009621 FEZ2 coding downstream 90851 2820340 ~ 2833536 (+)
XLOC_009622 clec3ba coding downstream 111286 2840775 ~ 2844195 (+)
XLOC_009623 lars2 coding downstream 170122 2899611 ~ 2990676 (+)
XLOC_009624 CABZ01043952.1 coding downstream 274933 3004422 ~ 3027240 (+)
XLOC_009625 NA coding downstream 323935 3053424 ~ 3059091 (+)
XLOC_009613 NA non-coding upstream 623817 1776515 ~ 2105556 (+)
XLOC_009614 NA non-coding upstream 868213 1860384 ~ 1861160 (+)
XLOC_009612 CABZ01085979.1 non-coding upstream 988315 1740937 ~ 1741058 (+)
XLOC_009627 NA non-coding downstream 406669 3136158 ~ 3137243 (+)
XLOC_009628 NA non-coding downstream 417773 3147262 ~ 3149817 (+)
XLOC_009629 NA non-coding downstream 453260 3182749 ~ 3192150 (+)
XLOC_009631 CABZ01052320.1 non-coding downstream 624012 3353501 ~ 3353617 (+)

Expression


Co-expression Network