CI01000050_07239689_07244721


Basic Information

Item Value
gene id CI01000050_07239689_07244721
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 7239615 ~ 7244721 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_07239689_07244721.mRNA
AAAATCTTGCCACCGGGGTACATTCACCTACTGTGTCACCATGAACTGCTGGAAATGTCAGGGGATGTTGAAAACTTTCGAGCGGCTCTTAAATTGCAGCTGATTACTGAGGAGCAGGTCCAAAGGTGGCTGGAGGACTTCCAAAAGACCTCAGCTTTAACATGGAGGAAATCCAGGACATACCCTGATTCTGGACGCTACAACAAATACAGAGTGGATCTGAGATGTCAACACAAAACGTACAGTTCATCATCCAAGACGTCCAAAAATACCAACTGCCCTGCTACCATGTTTCTGATTCTCAAGAGATATATGTATGAAAGAAAGTCTAGATCAGGAGATCCGCACATAGAAGAGGGCTATTTCCTTCATGTGAACTTAAGGAATGAACATAATCATAGACTGAACACTGCAGAAGTCATGAGGTGGAGAGATGTGTCTAATGACACCATTGAAAAGCTACAACAGCTCTACAAAAGTGGTCACTCTCCTTCATCTGCACTCAAAACCATCAAATACAACCTACAGGAAGAGGAAGGCGATAACTACATTTATGCTATTGCAGATCGATCCATTTGCCCGGACCTTCAGTTCTGCTACAGATTATACTACAAGCTTTTTCAAAAGTCATATGCTGAACCTGCAGAGAAGGACATTTCAGAAGAGCTTTTCAAACCATTAGAATTGGAACAGTCATGGGAGACGACGACAGTGACAGGACAAACCACGTGCATTGAAGATGGAGTGTCTGTTGCTACTCTACCAGTCATCACTGCAGAAGGAGAACATTTTACAGAAGACAATGAGCCAGGCCCAAGTGCAGCTGAAGAGGTTGTTGGGTCTTTGGACGGACAGCTCGAGGATATTTTTGGGATGCTAAAAAAGAAGCTAAATGAGGATCCAAGTTATACACCACCTATAAGAGCTTTTGTGTCCAATTTCTTTCAAATAAAGACTGACAGTGCTCTGCAGTCATCACTTTTTTGTTTTGGTAAGGCCACTCAGACAATCAATCAGATCACTATACAACCAGCTGCAGGTCCACGGAGGAGAGGGGCTTTGGCTGGACGTAGAGCTGTTGGCAGACCCCCAAAGAGCTCAAGAAGAGAGCACCCGTACTGCAACAGCAAATCCAACAACATTCCCCAAACTCTCACATTCTGTTTGCAGGAAAATAACACCCTTGAGAAGACAGATTAACTGCCTGTCCCCAGCACACTACCACCAGCTTTTGGTGTGTGTGGACATCCAAATACTGTGTAGAGGCTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_07239689_07244721.mRNA True 1274 mRNA 0.44 8 7239615 7244721

Neighbor

gene id symbol gene type direction distance location
CI01000050_07207399_07217984 OGG1 coding downstream 21631 7207175 ~ 7217984 (-)
CI01000050_07155856_07157697 NA coding downstream 81918 7154965 ~ 7157697 (-)
CI01000050_07047887_07057166 TAS1R2.2 coding downstream 182201 7047552 ~ 7057414 (-)
CI01000050_07037053_07037750 HER3 coding downstream 201801 7036592 ~ 7037814 (-)
CI01000050_07030874_07033872 NA coding downstream 205743 7030635 ~ 7033872 (-)
CI01000050_07307744_07309403 NA coding upstream 62690 7307411 ~ 7310537 (-)
CI01000050_07338022_07340567 ANGPTL7 coding upstream 92724 7337445 ~ 7341011 (-)
G216882 NA non-coding downstream 24628 7184655 ~ 7214987 (-)
G216879 NA non-coding downstream 65865 7168326 ~ 7173750 (-)
G216935 NA non-coding downstream 71562 7167835 ~ 7168053 (-)
G216930 NA non-coding downstream 81440 7157750 ~ 7158175 (-)
G216986 NA non-coding upstream 105152 7349873 ~ 7351492 (-)
G217012 NA non-coding upstream 157752 7402473 ~ 7460138 (-)
G217033 NA non-coding upstream 194103 7438824 ~ 7439461 (-)
G217050 NA non-coding upstream 245416 7490137 ~ 7494279 (-)
G216878 NA non-coding upstream 268642 7513363 ~ 7513944 (-)
G216931 NA other downstream 74214 7164095 ~ 7165401 (-)
G216408 NA other downstream 883104 6356017 ~ 6356511 (-)
G216093 NA other downstream 1687512 5489557 ~ 5552103 (-)
G215935 NA other downstream 2166506 5048916 ~ 5073109 (-)
CI01000050_04564233_04580815 KANSL3 other downstream 2626723 4563687 ~ 4581278 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_035962 si:dkey-75a21.2 coding NC_007119.7 CM002892.2 46327350 ~ 46348590 (+)